Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Gm16198-201ENSMUST00000118766 670 ntBASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Ighv8-14-201ENSMUST00000196781 358 ntBASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav7n-4A0A075B620 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Gm6550-201ENSMUST00000187574 993 ntBASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Gm14452-201ENSMUST00000118680 1632 ntBASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav7n-4A0A075B620 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms