Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC005829.1-201ENST00000570002 483 ntBASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 GPALPP1-207ENST00000611650 899 ntBASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTHRC1Q96CG8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CTHRC1Q96CG8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.33■□□□□ 0.05
CTHRC1Q96CG8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CTHRC1Q96CG8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CTHRC1Q96CG8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CTHRC1Q96CG8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
CTHRC1Q96CG8 AC138932.1-201ENST00000534164 6830 ntBASIC15.33■□□□□ 0.05
CTHRC1Q96CG8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CTHRC1Q96CG8 AL592424.1-201ENST00000563624 1536 ntBASIC15.33■□□□□ 0.05
CTHRC1Q96CG8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.33■□□□□ 0.05
CTHRC1Q96CG8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CTHRC1Q96CG8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.33■□□□□ 0.05
CTHRC1Q96CG8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 AC243562.1-201ENST00000560672 389 ntBASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 U82695.1-201ENST00000635752 1889 ntBASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 ELL2P1-201ENST00000413990 1906 ntBASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.33■□□□□ 0.04
CTHRC1Q96CG8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 AC006449.6-201ENST00000612330 2296 ntBASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 GPX1P2-201ENST00000429271 606 ntBASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 RN7SL589P-201ENST00000481268 310 ntBASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 AC026120.1-201ENST00000611536 926 ntBASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 AC139530.3-201ENST00000620344 690 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms