Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Prpf40bQ80W14 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Prpf40bQ80W14 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.71■□□□□ 0.1
Prpf40bQ80W14 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Prpf40bQ80W14 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Prpf40bQ80W14 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Prpf40bQ80W14 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Gm13350-201ENSMUST00000120519 479 ntBASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Gm3786-201ENSMUST00000202659 378 ntBASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Gm9823-201ENSMUST00000051212 327 ntBASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Gm10012-201ENSMUST00000078252 192 ntBASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40bQ80W14 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.69■□□□□ 0.1
Prpf40bQ80W14 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Mir8109-201ENSMUST00000184375 117 ntBASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Gm43818-201ENSMUST00000200605 466 ntBASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Gm3961-201ENSMUST00000204425 994 ntBASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40bQ80W14 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Gm8584-201ENSMUST00000171982 758 ntBASIC15.68■□□□□ 0.1
Prpf40bQ80W14 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Gm43094-201ENSMUST00000196549 921 ntBASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Gm38671-201ENSMUST00000200573 130 ntBASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Gm19078-201ENSMUST00000206311 727 ntBASIC15.68■□□□□ 0.1
Prpf40bQ80W14 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms