Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim43cP86449 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim43cP86449 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43cP86449 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43cP86449 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43cP86449 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43cP86449 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43cP86449 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.79□□□□□ -0.04
Trim43cP86449 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43cP86449 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43cP86449 Gm15770-201ENSMUST00000117498 584 ntBASIC14.79□□□□□ -0.04
Trim43cP86449 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim43cP86449 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim43cP86449 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trim43cP86449 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim43cP86449 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.79□□□□□ -0.04
Trim43cP86449 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Trim43cP86449 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43cP86449 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43cP86449 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43cP86449 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Trim43cP86449 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43cP86449 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43cP86449 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trim43cP86449 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43cP86449 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43cP86449 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43cP86449 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43cP86449 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43cP86449 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43cP86449 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43cP86449 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43cP86449 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim43cP86449 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Trim43cP86449 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim43cP86449 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trim43cP86449 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.78□□□□□ -0.04
Trim43cP86449 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim43cP86449 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trim43cP86449 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.78□□□□□ -0.04
Trim43cP86449 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.78□□□□□ -0.04
Trim43cP86449 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim43cP86449 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.78□□□□□ -0.04
Trim43cP86449 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim43cP86449 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim43cP86449 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim43cP86449 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43cP86449 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim43cP86449 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43cP86449 Syt7-205ENSMUST00000224135 1557 ntBASIC14.77□□□□□ -0.04
Trim43cP86449 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43cP86449 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.77□□□□□ -0.04
Trim43cP86449 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43cP86449 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.77□□□□□ -0.04
Trim43cP86449 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.77□□□□□ -0.04
Trim43cP86449 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43cP86449 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43cP86449 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43cP86449 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trim43cP86449 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43cP86449 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
Trim43cP86449 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.77□□□□□ -0.04
Trim43cP86449 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43cP86449 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43cP86449 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43cP86449 Gm15678-201ENSMUST00000117573 960 ntBASIC14.77□□□□□ -0.05
Trim43cP86449 Gm12485-201ENSMUST00000119641 291 ntBASIC14.77□□□□□ -0.05
Trim43cP86449 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.77□□□□□ -0.05
Trim43cP86449 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43cP86449 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43cP86449 Gm28631-201ENSMUST00000190740 334 ntBASIC14.77□□□□□ -0.05
Trim43cP86449 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.77□□□□□ -0.05
Trim43cP86449 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms