Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
TfamP40630 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TfamP40630 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TfamP40630 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TfamP40630 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TfamP40630 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TfamP40630 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TfamP40630 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TfamP40630 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TfamP40630 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TfamP40630 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TfamP40630 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TfamP40630 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TfamP40630 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TfamP40630 Gm25144-201ENSMUST00000179561 110 ntBASIC13.2□□□□□ -0.3
TfamP40630 Gm25352-201ENSMUST00000179815 110 ntBASIC13.2□□□□□ -0.3
TfamP40630 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.2□□□□□ -0.3
TfamP40630 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TfamP40630 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TfamP40630 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.2□□□□□ -0.3
TfamP40630 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TfamP40630 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.2□□□□□ -0.3
TfamP40630 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TfamP40630 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TfamP40630 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TfamP40630 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TfamP40630 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TfamP40630 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TfamP40630 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TfamP40630 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TfamP40630 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TfamP40630 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TfamP40630 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.2□□□□□ -0.3
TfamP40630 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TfamP40630 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.19□□□□□ -0.3
TfamP40630 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.19□□□□□ -0.3
TfamP40630 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TfamP40630 Gm26308-201ENSMUST00000157768 69 ntBASIC13.19□□□□□ -0.3
TfamP40630 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.19□□□□□ -0.3
TfamP40630 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.19□□□□□ -0.3
TfamP40630 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TfamP40630 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.19□□□□□ -0.3
TfamP40630 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TfamP40630 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TfamP40630 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TfamP40630 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TfamP40630 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TfamP40630 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TfamP40630 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TfamP40630 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.18□□□□□ -0.3
TfamP40630 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TfamP40630 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TfamP40630 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TfamP40630 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TfamP40630 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.18□□□□□ -0.3
TfamP40630 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TfamP40630 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TfamP40630 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TfamP40630 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TfamP40630 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TfamP40630 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.18□□□□□ -0.3
TfamP40630 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.18□□□□□ -0.3
TfamP40630 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.18□□□□□ -0.3
TfamP40630 Gm25948-201ENSMUST00000175334 112 ntBASIC13.18□□□□□ -0.3
TfamP40630 Gm8927-201ENSMUST00000181978 981 ntBASIC13.18□□□□□ -0.3
TfamP40630 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.18□□□□□ -0.3
TfamP40630 Gm3222-201ENSMUST00000071282 990 ntBASIC13.18□□□□□ -0.3
TfamP40630 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TfamP40630 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TfamP40630 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TfamP40630 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TfamP40630 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TfamP40630 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TfamP40630 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TfamP40630 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TfamP40630 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms