Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tubgcp6G5E8P0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC18.52■□□□□ 0.55
Tubgcp6G5E8P0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tubgcp6G5E8P0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tubgcp6G5E8P0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Gm8908-201ENSMUST00000121633 1024 ntBASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Gm26185-201ENSMUST00000157692 266 ntBASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Gm8738-201ENSMUST00000172606 329 ntBASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Gm9555-201ENSMUST00000200908 583 ntBASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Gm45219-201ENSMUST00000205602 465 ntBASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Gm43399-201ENSMUST00000202546 2374 ntBASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp6G5E8P0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Gm11531-201ENSMUST00000117614 555 ntBASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Gm14109-201ENSMUST00000118814 309 ntBASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Gm25700-201ENSMUST00000177693 110 ntBASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Gm3508-201ENSMUST00000186012 792 ntBASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp6G5E8P0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Gm27046-201ENSMUST00000182160 463 ntBASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Gm5639-201ENSMUST00000122305 2403 ntBASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp6G5E8P0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 Gm7899-201ENSMUST00000192935 1897 ntBASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 Ighv5-7-201ENSMUST00000192302 244 ntBASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 Gm45224-201ENSMUST00000208203 414 ntBASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 Gm43081-201ENSMUST00000199082 1380 ntBASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp6G5E8P0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms