Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.29□□□□□ -0.12
RpainQ9CWY9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Gm5479-201ENSMUST00000160578 435 ntBASIC14.28□□□□□ -0.12
RpainQ9CWY9 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RpainQ9CWY9 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RpainQ9CWY9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.27□□□□□ -0.12
RpainQ9CWY9 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RpainQ9CWY9 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
RpainQ9CWY9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RpainQ9CWY9 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RpainQ9CWY9 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RpainQ9CWY9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RpainQ9CWY9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RpainQ9CWY9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
RpainQ9CWY9 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.27□□□□□ -0.12
RpainQ9CWY9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RpainQ9CWY9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RpainQ9CWY9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
RpainQ9CWY9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RpainQ9CWY9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RpainQ9CWY9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RpainQ9CWY9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.27□□□□□ -0.13
RpainQ9CWY9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RpainQ9CWY9 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.27□□□□□ -0.13
RpainQ9CWY9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RpainQ9CWY9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RpainQ9CWY9 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RpainQ9CWY9 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
RpainQ9CWY9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.27□□□□□ -0.13
RpainQ9CWY9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.27□□□□□ -0.13
RpainQ9CWY9 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RpainQ9CWY9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RpainQ9CWY9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RpainQ9CWY9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RpainQ9CWY9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RpainQ9CWY9 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RpainQ9CWY9 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RpainQ9CWY9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RpainQ9CWY9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RpainQ9CWY9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RpainQ9CWY9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RpainQ9CWY9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RpainQ9CWY9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RpainQ9CWY9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RpainQ9CWY9 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RpainQ9CWY9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RpainQ9CWY9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.26□□□□□ -0.13
RpainQ9CWY9 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.26□□□□□ -0.13
RpainQ9CWY9 Gm13453-201ENSMUST00000118708 357 ntBASIC14.26□□□□□ -0.13
RpainQ9CWY9 Gm13464-201ENSMUST00000119418 935 ntBASIC14.26□□□□□ -0.13
RpainQ9CWY9 Gm12428-201ENSMUST00000119844 727 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms