Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ACAP3Q96P50 AL139400.1-201ENST00000366220 510 ntBASIC18.02■□□□□ 0.48
ACAP3Q96P50 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
ACAP3Q96P50 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.02■□□□□ 0.48
ACAP3Q96P50 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ACAP3Q96P50 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.02■□□□□ 0.48
ACAP3Q96P50 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ACAP3Q96P50 KRT18P32-201ENST00000424695 1287 ntBASIC18.02■□□□□ 0.48
ACAP3Q96P50 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.02■□□□□ 0.48
ACAP3Q96P50 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ACAP3Q96P50 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.02■□□□□ 0.48
ACAP3Q96P50 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ACAP3Q96P50 HLA-J-203ENST00000494367 1087 ntBASIC18.02■□□□□ 0.48
ACAP3Q96P50 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ACAP3Q96P50 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.02■□□□□ 0.48
ACAP3Q96P50 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.02■□□□□ 0.48
ACAP3Q96P50 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.02■□□□□ 0.48
ACAP3Q96P50 AL512652.2-201ENST00000625156 1716 ntBASIC18.02■□□□□ 0.48
ACAP3Q96P50 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ACAP3Q96P50 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ACAP3Q96P50 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ACAP3Q96P50 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ACAP3Q96P50 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.02■□□□□ 0.47
ACAP3Q96P50 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ACAP3Q96P50 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.02■□□□□ 0.47
ACAP3Q96P50 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.02■□□□□ 0.47
ACAP3Q96P50 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ACAP3Q96P50 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.02■□□□□ 0.47
ACAP3Q96P50 AC124067.4-201ENST00000519691 2379 ntBASIC18.02■□□□□ 0.47
ACAP3Q96P50 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.02■□□□□ 0.47
ACAP3Q96P50 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ACAP3Q96P50 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ACAP3Q96P50 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ACAP3Q96P50 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
ACAP3Q96P50 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.01■□□□□ 0.47
ACAP3Q96P50 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
ACAP3Q96P50 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACAP3Q96P50 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ACAP3Q96P50 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ACAP3Q96P50 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ACAP3Q96P50 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
ACAP3Q96P50 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ACAP3Q96P50 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACAP3Q96P50 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACAP3Q96P50 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ACAP3Q96P50 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ACAP3Q96P50 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.01■□□□□ 0.47
ACAP3Q96P50 AC004449.1-201ENST00000564240 433 ntBASIC18.01■□□□□ 0.47
ACAP3Q96P50 AL138918.1-201ENST00000568306 659 ntBASIC18.01■□□□□ 0.47
ACAP3Q96P50 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.01■□□□□ 0.47
ACAP3Q96P50 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.01■□□□□ 0.47
ACAP3Q96P50 AC009093.7-201ENST00000623853 1223 ntBASIC18.01■□□□□ 0.47
ACAP3Q96P50 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACAP3Q96P50 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.01■□□□□ 0.47
ACAP3Q96P50 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
ACAP3Q96P50 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ACAP3Q96P50 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ACAP3Q96P50 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACAP3Q96P50 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACAP3Q96P50 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.01■□□□□ 0.47
ACAP3Q96P50 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
ACAP3Q96P50 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.01■□□□□ 0.47
ACAP3Q96P50 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACAP3Q96P50 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ACAP3Q96P50 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACAP3Q96P50 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
ACAP3Q96P50 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18■□□□□ 0.47
ACAP3Q96P50 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18■□□□□ 0.47
ACAP3Q96P50 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACAP3Q96P50 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18■□□□□ 0.47
ACAP3Q96P50 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18■□□□□ 0.47
ACAP3Q96P50 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18■□□□□ 0.47
ACAP3Q96P50 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
ACAP3Q96P50 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACAP3Q96P50 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18■□□□□ 0.47
ACAP3Q96P50 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ACAP3Q96P50 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACAP3Q96P50 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18■□□□□ 0.47
ACAP3Q96P50 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18■□□□□ 0.47
ACAP3Q96P50 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18■□□□□ 0.47
ACAP3Q96P50 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18■□□□□ 0.47
ACAP3Q96P50 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACAP3Q96P50 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ACAP3Q96P50 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18■□□□□ 0.47
ACAP3Q96P50 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
ACAP3Q96P50 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18■□□□□ 0.47
ACAP3Q96P50 FAM58DP-201ENST00000428076 619 ntBASIC18■□□□□ 0.47
ACAP3Q96P50 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18■□□□□ 0.47
ACAP3Q96P50 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18■□□□□ 0.47
ACAP3Q96P50 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18■□□□□ 0.47
ACAP3Q96P50 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18■□□□□ 0.47
ACAP3Q96P50 LINC00628-201ENST00000628516 1289 ntBASIC18■□□□□ 0.47
ACAP3Q96P50 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACAP3Q96P50 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACAP3Q96P50 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18■□□□□ 0.47
ACAP3Q96P50 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACAP3Q96P50 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
ACAP3Q96P50 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ACAP3Q96P50 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
ACAP3Q96P50 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms