Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Gm9396-201ENSMUST00000076703 567 ntBASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rdh1Q8CGV4 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Mir7085-201ENSMUST00000184353 66 ntBASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Gm26315-201ENSMUST00000083890 321 ntBASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rdh1Q8CGV4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Gm27847-201ENSMUST00000183711 107 ntBASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Gm27375-201ENSMUST00000183799 107 ntBASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Gm8598-201ENSMUST00000221184 836 ntBASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.21□□□□□ -0.29
Rdh1Q8CGV4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms