Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.23□□□□□ -0.61
Smco3Q8BQM7 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Gm10275-202ENSMUST00000168697 495 ntBASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Gm27300-201ENSMUST00000184085 97 ntBASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Gm27335-201ENSMUST00000184758 97 ntBASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Gm10275-201ENSMUST00000092620 635 ntBASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smco3Q8BQM7 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Gm16198-201ENSMUST00000118766 670 ntBASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Gm27459-201ENSMUST00000184860 107 ntBASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms