Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 HNRNPA1P48-201ENST00000562726 1377 ntBASIC11.39□□□□□ -0.59
CSMD3Q7Z407 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 NEU3-203ENST00000529024 581 ntTSL 3 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 AP000812.2-201ENST00000538934 718 ntBASIC11.39□□□□□ -0.59
CSMD3Q7Z407 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 BRWD1P1-201ENST00000401091 371 ntBASIC11.39□□□□□ -0.59
CSMD3Q7Z407 FXNP2-201ENST00000411625 547 ntBASIC11.39□□□□□ -0.59
CSMD3Q7Z407 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 AC098859.1-201ENST00000502915 1238 ntBASIC11.39□□□□□ -0.59
CSMD3Q7Z407 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 RPS24-214ENST00000613865 538 ntTSL 5 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 AL589702.1-201ENST00000641229 1509 ntBASIC11.39□□□□□ -0.59
CSMD3Q7Z407 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 GGT4P-201ENST00000623672 1708 ntBASIC11.38□□□□□ -0.59
CSMD3Q7Z407 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 DUX4L45-201ENST00000566406 1057 ntBASIC11.38□□□□□ -0.59
CSMD3Q7Z407 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 EML3-212ENST00000494176 2901 ntTSL 2 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 EML3-216ENST00000529309 2909 ntTSL 2 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 APOC3-202ENST00000375345 604 ntTSL 5 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CSMD3Q7Z407 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms