Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdkn2bP55271 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdkn2bP55271 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdkn2bP55271 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdkn2bP55271 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdkn2bP55271 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdkn2bP55271 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.09□□□□□ -0.31
Cdkn2bP55271 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdkn2bP55271 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdkn2bP55271 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.09□□□□□ -0.31
Cdkn2bP55271 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cdkn2bP55271 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdkn2bP55271 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Cdkn2bP55271 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Cdkn2bP55271 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdkn2bP55271 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdkn2bP55271 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdkn2bP55271 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Cdkn2bP55271 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdkn2bP55271 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.08□□□□□ -0.32
Cdkn2bP55271 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Gm8927-201ENSMUST00000181978 981 ntBASIC13.08□□□□□ -0.32
Cdkn2bP55271 Gm27525-201ENSMUST00000184465 107 ntBASIC13.08□□□□□ -0.32
Cdkn2bP55271 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Gm43474-201ENSMUST00000196415 774 ntBASIC13.08□□□□□ -0.32
Cdkn2bP55271 Gm44335-201ENSMUST00000196879 141 ntBASIC13.08□□□□□ -0.32
Cdkn2bP55271 Gm44297-201ENSMUST00000198304 141 ntBASIC13.08□□□□□ -0.32
Cdkn2bP55271 Gm44346-201ENSMUST00000198851 141 ntBASIC13.08□□□□□ -0.32
Cdkn2bP55271 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.08□□□□□ -0.32
Cdkn2bP55271 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.08□□□□□ -0.32
Cdkn2bP55271 Gm3222-201ENSMUST00000071282 990 ntBASIC13.08□□□□□ -0.32
Cdkn2bP55271 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cdkn2bP55271 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cdkn2bP55271 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Gm13385-201ENSMUST00000121089 220 ntBASIC13.07□□□□□ -0.32
Cdkn2bP55271 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdkn2bP55271 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdkn2bP55271 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdkn2bP55271 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cdkn2bP55271 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdkn2bP55271 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdkn2bP55271 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cdkn2bP55271 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdkn2bP55271 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdkn2bP55271 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdkn2bP55271 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.06□□□□□ -0.32
Cdkn2bP55271 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdkn2bP55271 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdkn2bP55271 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms