Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.66□□□□□ -0.22
Fdft1P53798 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Fdft1P53798 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.66□□□□□ -0.22
Fdft1P53798 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.66□□□□□ -0.22
Fdft1P53798 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.66□□□□□ -0.22
Fdft1P53798 Gm2445-201ENSMUST00000182798 989 ntBASIC13.66□□□□□ -0.22
Fdft1P53798 Gm17837-201ENSMUST00000186435 985 ntBASIC13.66□□□□□ -0.22
Fdft1P53798 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.66□□□□□ -0.22
Fdft1P53798 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.66□□□□□ -0.22
Fdft1P53798 Gm6888-201ENSMUST00000221983 706 ntBASIC13.66□□□□□ -0.22
Fdft1P53798 Gm9229-201ENSMUST00000222777 126 ntBASIC13.66□□□□□ -0.22
Fdft1P53798 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Fdft1P53798 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.66□□□□□ -0.22
Fdft1P53798 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Fdft1P53798 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Fdft1P53798 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.66□□□□□ -0.22
Fdft1P53798 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fdft1P53798 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.65□□□□□ -0.22
Fdft1P53798 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fdft1P53798 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Fdft1P53798 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.65□□□□□ -0.22
Fdft1P53798 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fdft1P53798 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Fdft1P53798 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fdft1P53798 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fdft1P53798 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Fdft1P53798 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fdft1P53798 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Fdft1P53798 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.65□□□□□ -0.22
Fdft1P53798 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Fdft1P53798 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Fdft1P53798 Gm44344-201ENSMUST00000200287 129 ntBASIC13.65□□□□□ -0.22
Fdft1P53798 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.65□□□□□ -0.22
Fdft1P53798 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.65□□□□□ -0.22
Fdft1P53798 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fdft1P53798 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fdft1P53798 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fdft1P53798 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fdft1P53798 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Fdft1P53798 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fdft1P53798 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fdft1P53798 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fdft1P53798 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fdft1P53798 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.65□□□□□ -0.22
Fdft1P53798 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.65□□□□□ -0.22
Fdft1P53798 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Fdft1P53798 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fdft1P53798 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.65□□□□□ -0.22
Fdft1P53798 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Fdft1P53798 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.65□□□□□ -0.22
Fdft1P53798 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Fdft1P53798 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Fdft1P53798 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.64□□□□□ -0.23
Fdft1P53798 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.64□□□□□ -0.23
Fdft1P53798 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Fdft1P53798 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.64□□□□□ -0.23
Fdft1P53798 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.64□□□□□ -0.23
Fdft1P53798 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Fdft1P53798 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fdft1P53798 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fdft1P53798 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fdft1P53798 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Fdft1P53798 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms