Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.47□□□□□ -0.57
Mmp9P41245 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Mmp9P41245 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Mmp9P41245 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Mmp9P41245 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp9P41245 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp9P41245 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp9P41245 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Mmp9P41245 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp9P41245 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp9P41245 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp9P41245 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp9P41245 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.46□□□□□ -0.57
Mmp9P41245 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp9P41245 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp9P41245 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp9P41245 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp9P41245 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp9P41245 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.46□□□□□ -0.57
Mmp9P41245 Gm4899-201ENSMUST00000178708 719 ntBASIC11.46□□□□□ -0.57
Mmp9P41245 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.46□□□□□ -0.57
Mmp9P41245 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.46□□□□□ -0.57
Mmp9P41245 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp9P41245 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Mmp9P41245 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.46□□□□□ -0.57
Mmp9P41245 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp9P41245 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp9P41245 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp9P41245 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp9P41245 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.46□□□□□ -0.57
Mmp9P41245 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp9P41245 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp9P41245 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp9P41245 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Mmp9P41245 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
Mmp9P41245 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp9P41245 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp9P41245 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp9P41245 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp9P41245 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp9P41245 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp9P41245 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Mmp9P41245 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Mmp9P41245 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp9P41245 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp9P41245 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp9P41245 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp9P41245 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp9P41245 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.46□□□□□ -0.58
Mmp9P41245 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Mmp9P41245 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp9P41245 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Mmp9P41245 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.45□□□□□ -0.58
Mmp9P41245 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Mmp9P41245 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Mmp9P41245 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Mmp9P41245 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.45□□□□□ -0.58
Mmp9P41245 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Mmp9P41245 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.45□□□□□ -0.58
Mmp9P41245 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.45□□□□□ -0.58
Mmp9P41245 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.45□□□□□ -0.58
Mmp9P41245 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Mmp9P41245 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Mmp9P41245 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.45□□□□□ -0.58
Mmp9P41245 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Mmp9P41245 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms