Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RAPGEF3O95398 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RAPGEF3O95398 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC24.51■■□□□ 1.51
RAPGEF3O95398 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RAPGEF3O95398 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC24.5■■□□□ 1.51
RAPGEF3O95398 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
RAPGEF3O95398 MSTO2P-201ENST00000314835 1709 ntBASIC24.5■■□□□ 1.51
RAPGEF3O95398 AL136982.4-201ENST00000437689 1740 ntBASIC24.5■■□□□ 1.51
RAPGEF3O95398 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
RAPGEF3O95398 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RAPGEF3O95398 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC24.5■■□□□ 1.51
RAPGEF3O95398 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
RAPGEF3O95398 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC24.5■■□□□ 1.51
RAPGEF3O95398 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC24.5■■□□□ 1.51
RAPGEF3O95398 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC24.5■■□□□ 1.51
RAPGEF3O95398 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC24.5■■□□□ 1.51
RAPGEF3O95398 ATF5-205ENST00000600336 682 ntTSL 2 BASIC24.5■■□□□ 1.51
RAPGEF3O95398 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC24.5■■□□□ 1.51
RAPGEF3O95398 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC24.5■■□□□ 1.51
RAPGEF3O95398 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RAPGEF3O95398 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
RAPGEF3O95398 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
RAPGEF3O95398 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RAPGEF3O95398 Z97205.2-201ENST00000564697 1639 ntBASIC24.5■■□□□ 1.51
RAPGEF3O95398 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF3O95398 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC24.49■■□□□ 1.51
RAPGEF3O95398 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC24.49■■□□□ 1.51
RAPGEF3O95398 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC24.49■■□□□ 1.51
RAPGEF3O95398 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF3O95398 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC24.49■■□□□ 1.51
RAPGEF3O95398 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF3O95398 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF3O95398 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF3O95398 MIR326-201ENST00000362220 95 ntBASIC24.49■■□□□ 1.51
RAPGEF3O95398 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF3O95398 FO393414.2-201ENST00000405153 598 ntBASIC24.49■■□□□ 1.51
RAPGEF3O95398 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC24.49■■□□□ 1.51
RAPGEF3O95398 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC24.49■■□□□ 1.51
RAPGEF3O95398 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF3O95398 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
RAPGEF3O95398 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
RAPGEF3O95398 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
RAPGEF3O95398 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF3O95398 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF3O95398 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF3O95398 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF3O95398 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC24.49■■□□□ 1.51
RAPGEF3O95398 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF3O95398 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF3O95398 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF3O95398 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF3O95398 SLC25A24-204ENST00000569674 2357 ntBASIC24.49■■□□□ 1.51
RAPGEF3O95398 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF3O95398 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF3O95398 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC24.48■■□□□ 1.51
RAPGEF3O95398 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF3O95398 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF3O95398 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF3O95398 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
RAPGEF3O95398 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF3O95398 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF3O95398 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
RAPGEF3O95398 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF3O95398 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC24.48■■□□□ 1.51
RAPGEF3O95398 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC24.48■■□□□ 1.51
RAPGEF3O95398 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF3O95398 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC24.48■■□□□ 1.51
RAPGEF3O95398 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
RAPGEF3O95398 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF3O95398 ACTG1P17-201ENST00000558391 1119 ntBASIC24.48■■□□□ 1.51
RAPGEF3O95398 DUX4L45-201ENST00000566406 1057 ntBASIC24.48■■□□□ 1.51
RAPGEF3O95398 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
RAPGEF3O95398 AL365330.1-201ENST00000607459 531 ntBASIC24.48■■□□□ 1.51
RAPGEF3O95398 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF3O95398 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
RAPGEF3O95398 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RAPGEF3O95398 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
RAPGEF3O95398 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC24.47■■□□□ 1.51
RAPGEF3O95398 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC24.47■■□□□ 1.51
RAPGEF3O95398 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC24.47■■□□□ 1.51
RAPGEF3O95398 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
RAPGEF3O95398 ZBTB12BP-201ENST00000314232 1122 ntBASIC24.47■■□□□ 1.51
RAPGEF3O95398 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
RAPGEF3O95398 TPO-206ENST00000382269 1155 ntTSL 5 BASIC24.47■■□□□ 1.51
RAPGEF3O95398 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC24.47■■□□□ 1.51
RAPGEF3O95398 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC24.47■■□□□ 1.51
RAPGEF3O95398 NEU3-202ENST00000526068 431 ntTSL 2 BASIC24.47■■□□□ 1.51
RAPGEF3O95398 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC24.47■■□□□ 1.51
RAPGEF3O95398 AC124283.3-201ENST00000570869 594 ntBASIC24.47■■□□□ 1.51
RAPGEF3O95398 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC24.47■■□□□ 1.51
RAPGEF3O95398 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC24.47■■□□□ 1.51
RAPGEF3O95398 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RAPGEF3O95398 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RAPGEF3O95398 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RAPGEF3O95398 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC24.47■■□□□ 1.51
RAPGEF3O95398 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC24.47■■□□□ 1.51
RAPGEF3O95398 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RAPGEF3O95398 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RAPGEF3O95398 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RAPGEF3O95398 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms