Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim52Q8CDV4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Gm25261-201ENSMUST00000157416 134 ntBASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Gm25927-201ENSMUST00000175058 117 ntBASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim52Q8CDV4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Gm8801-201ENSMUST00000173255 1064 ntBASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Mir8109-201ENSMUST00000184375 117 ntBASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC16.75■□□□□ 0.27
Trim52Q8CDV4 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim52Q8CDV4 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Gm4935-201ENSMUST00000221316 1198 ntBASIC16.74■□□□□ 0.27
Trim52Q8CDV4 AC134254.1-201ENSMUST00000221362 167 ntBASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim52Q8CDV4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Gm8805-201ENSMUST00000117848 313 ntBASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms