Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm11814-201ENSMUST00000119515 929 ntBASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Gm27486-201ENSMUST00000184923 80 ntBASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.54□□□□□ -0.08
Shroom1Q5SX79 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Gm12928-201ENSMUST00000117115 573 ntBASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Gm11425-201ENSMUST00000119608 498 ntBASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Gm27839-201ENSMUST00000184242 106 ntBASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Gm9396-201ENSMUST00000076703 567 ntBASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Mir497b-201ENSMUST00000093601 125 ntBASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shroom1Q5SX79 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.52□□□□□ -0.08
Shroom1Q5SX79 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shroom1Q5SX79 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Shroom1Q5SX79 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shroom1Q5SX79 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Shroom1Q5SX79 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Shroom1Q5SX79 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shroom1Q5SX79 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shroom1Q5SX79 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shroom1Q5SX79 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shroom1Q5SX79 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.52□□□□□ -0.08
Shroom1Q5SX79 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shroom1Q5SX79 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Shroom1Q5SX79 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shroom1Q5SX79 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.52□□□□□ -0.09
Shroom1Q5SX79 Mir1982-201ENSMUST00000157368 74 ntBASIC14.52□□□□□ -0.09
Shroom1Q5SX79 Mir1938-201ENSMUST00000158746 100 ntBASIC14.52□□□□□ -0.09
Shroom1Q5SX79 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shroom1Q5SX79 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shroom1Q5SX79 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shroom1Q5SX79 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.52□□□□□ -0.09
Shroom1Q5SX79 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shroom1Q5SX79 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shroom1Q5SX79 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shroom1Q5SX79 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shroom1Q5SX79 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shroom1Q5SX79 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms