Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.38□□□□□ -0.43
Rfx3P48381 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.38□□□□□ -0.43
Rfx3P48381 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rfx3P48381 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rfx3P48381 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.38□□□□□ -0.43
Rfx3P48381 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.38□□□□□ -0.43
Rfx3P48381 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.37□□□□□ -0.43
Rfx3P48381 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.37□□□□□ -0.43
Rfx3P48381 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.37□□□□□ -0.43
Rfx3P48381 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Rfx3P48381 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.37□□□□□ -0.43
Rfx3P48381 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.37□□□□□ -0.43
Rfx3P48381 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.37□□□□□ -0.43
Rfx3P48381 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.37□□□□□ -0.43
Rfx3P48381 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.37□□□□□ -0.43
Rfx3P48381 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rfx3P48381 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.37□□□□□ -0.43
Rfx3P48381 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Rfx3P48381 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.37□□□□□ -0.43
Rfx3P48381 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rfx3P48381 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx3P48381 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx3P48381 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx3P48381 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx3P48381 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx3P48381 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx3P48381 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx3P48381 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx3P48381 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx3P48381 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx3P48381 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Rfx3P48381 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx3P48381 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.36□□□□□ -0.43
Rfx3P48381 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.36□□□□□ -0.43
Rfx3P48381 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx3P48381 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.36□□□□□ -0.43
Rfx3P48381 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.36□□□□□ -0.43
Rfx3P48381 Gm5779-201ENSMUST00000218467 910 ntBASIC12.36□□□□□ -0.43
Rfx3P48381 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.36□□□□□ -0.43
Rfx3P48381 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Rfx3P48381 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx3P48381 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx3P48381 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx3P48381 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx3P48381 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx3P48381 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx3P48381 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.36□□□□□ -0.43
Rfx3P48381 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx3P48381 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.36□□□□□ -0.43
Rfx3P48381 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Rfx3P48381 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx3P48381 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.35□□□□□ -0.43
Rfx3P48381 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Rfx3P48381 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.35□□□□□ -0.43
Rfx3P48381 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.35□□□□□ -0.43
Rfx3P48381 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Mir449b-201ENSMUST00000104833 80 ntBASIC12.35□□□□□ -0.43
Rfx3P48381 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Gm8410-201ENSMUST00000117225 605 ntBASIC12.35□□□□□ -0.43
Rfx3P48381 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms