Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.89□□□□□ -0.19
Vps4bP46467 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Vps4bP46467 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps4bP46467 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vps4bP46467 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vps4bP46467 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Vps4bP46467 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps4bP46467 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Vps4bP46467 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps4bP46467 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps4bP46467 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps4bP46467 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vps4bP46467 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vps4bP46467 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Vps4bP46467 Mir1897-201ENSMUST00000122581 272 ntBASIC13.88□□□□□ -0.19
Vps4bP46467 Gm21470-201ENSMUST00000187680 696 ntBASIC13.88□□□□□ -0.19
Vps4bP46467 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vps4bP46467 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.88□□□□□ -0.19
Vps4bP46467 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Vps4bP46467 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.88□□□□□ -0.19
Vps4bP46467 Gm9229-201ENSMUST00000222777 126 ntBASIC13.88□□□□□ -0.19
Vps4bP46467 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps4bP46467 Mir497b-201ENSMUST00000093601 125 ntBASIC13.88□□□□□ -0.19
Vps4bP46467 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps4bP46467 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Vps4bP46467 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps4bP46467 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps4bP46467 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.88□□□□□ -0.19
Vps4bP46467 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps4bP46467 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps4bP46467 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Vps4bP46467 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps4bP46467 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Vps4bP46467 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vps4bP46467 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps4bP46467 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps4bP46467 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps4bP46467 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.87□□□□□ -0.19
Vps4bP46467 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Vps4bP46467 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 Gm22175-201ENSMUST00000175007 78 ntBASIC13.87□□□□□ -0.19
Vps4bP46467 Gm25144-201ENSMUST00000179561 110 ntBASIC13.87□□□□□ -0.19
Vps4bP46467 Gm25352-201ENSMUST00000179815 110 ntBASIC13.87□□□□□ -0.19
Vps4bP46467 Gm4804-201ENSMUST00000182234 999 ntBASIC13.87□□□□□ -0.19
Vps4bP46467 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.87□□□□□ -0.19
Vps4bP46467 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.87□□□□□ -0.19
Vps4bP46467 Gm27622-201ENSMUST00000183779 60 ntBASIC13.87□□□□□ -0.19
Vps4bP46467 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.87□□□□□ -0.19
Vps4bP46467 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.87□□□□□ -0.19
Vps4bP46467 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.87□□□□□ -0.19
Vps4bP46467 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Vps4bP46467 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Vps4bP46467 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Vps4bP46467 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Vps4bP46467 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.87□□□□□ -0.19
Vps4bP46467 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps4bP46467 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Vps4bP46467 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Vps4bP46467 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vps4bP46467 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.86□□□□□ -0.19
Vps4bP46467 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.86□□□□□ -0.19
Vps4bP46467 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.86□□□□□ -0.19
Vps4bP46467 Gm5425-201ENSMUST00000214125 459 ntBASIC13.86□□□□□ -0.19
Vps4bP46467 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.86□□□□□ -0.19
Vps4bP46467 Shd-206ENSMUST00000225145 998 ntBASIC13.86□□□□□ -0.19
Vps4bP46467 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Vps4bP46467 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.86□□□□□ -0.19
Vps4bP46467 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms