Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl1P12850 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl1P12850 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl1P12850 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cxcl1P12850 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl1P12850 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.32□□□□□ -0.6
Cxcl1P12850 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl1P12850 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl1P12850 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl1P12850 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl1P12850 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl1P12850 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl1P12850 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.32□□□□□ -0.6
Cxcl1P12850 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl1P12850 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl1P12850 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Cxcl1P12850 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cxcl1P12850 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cxcl1P12850 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cxcl1P12850 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.31□□□□□ -0.6
Cxcl1P12850 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.31□□□□□ -0.6
Cxcl1P12850 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Cxcl1P12850 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.31□□□□□ -0.6
Cxcl1P12850 Gm11745-201ENSMUST00000121669 448 ntBASIC11.31□□□□□ -0.6
Cxcl1P12850 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC11.31□□□□□ -0.6
Cxcl1P12850 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.31□□□□□ -0.6
Cxcl1P12850 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.31□□□□□ -0.6
Cxcl1P12850 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.31□□□□□ -0.6
Cxcl1P12850 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.31□□□□□ -0.6
Cxcl1P12850 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.31□□□□□ -0.6
Cxcl1P12850 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.31□□□□□ -0.6
Cxcl1P12850 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 Syt7-205ENSMUST00000224135 1557 ntBASIC11.31□□□□□ -0.6
Cxcl1P12850 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Cxcl1P12850 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.31□□□□□ -0.6
Cxcl1P12850 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.31□□□□□ -0.6
Cxcl1P12850 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Cxcl1P12850 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl1P12850 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cxcl1P12850 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cxcl1P12850 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Cxcl1P12850 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cxcl1P12850 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.3□□□□□ -0.6
Cxcl1P12850 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Cxcl1P12850 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cxcl1P12850 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.3□□□□□ -0.6
Cxcl1P12850 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.3□□□□□ -0.6
Cxcl1P12850 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.3□□□□□ -0.6
Cxcl1P12850 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Cxcl1P12850 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cxcl1P12850 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.3□□□□□ -0.6
Cxcl1P12850 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Cxcl1P12850 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
Cxcl1P12850 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cxcl1P12850 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl1P12850 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms