Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Gm9385-201ENSMUST00000117563 472 ntBASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Gm5177-201ENSMUST00000183092 997 ntBASIC11.05□□□□□ -0.64
Gm12887B1AVM1 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12887B1AVM1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Gm7862-201ENSMUST00000121461 292 ntBASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Gm29741-201ENSMUST00000192667 421 ntBASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Gm34391-201ENSMUST00000203706 907 ntBASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Gm44719-201ENSMUST00000206404 149 ntBASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12887B1AVM1 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms