Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Olfr129-201ENSMUST00000122318 993 ntBASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 AL672049.1-201ENSMUST00000197943 91 ntBASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Gm43332-201ENSMUST00000202511 1044 ntBASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Igkv8-27A0A0G2JF28 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Igkv8-27A0A0G2JF28 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.04
Igkv8-27A0A0G2JF28 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Igkv8-27A0A0G2JF28 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC8.52□□□□□ -1.04
Igkv8-27A0A0G2JF28 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Igkv8-27A0A0G2JF28 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Gm45643-201ENSMUST00000211364 1484 ntBASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Gm37472-201ENSMUST00000192342 4052 ntBASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 AC108846.1-201ENSMUST00000214531 513 ntBASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Gm7787-201ENSMUST00000216858 688 ntBASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Igkv8-27A0A0G2JF28 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms