Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 AC154806.6-201ENSMUST00000228192 202 ntBASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm43570-201ENSMUST00000199951 3688 ntBASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm13453-201ENSMUST00000118708 357 ntBASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 AC153872.1-201ENSMUST00000199539 128 ntBASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms