Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sec61a2Q9JLR1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a2Q9JLR1 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a2Q9JLR1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a2Q9JLR1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.36□□□□□ -0.43
Sec61a2Q9JLR1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a2Q9JLR1 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a2Q9JLR1 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a2Q9JLR1 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Gm12428-201ENSMUST00000119844 727 ntBASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Gm25144-201ENSMUST00000179561 110 ntBASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Gm25352-201ENSMUST00000179815 110 ntBASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Gm6916-202ENSMUST00000205523 195 ntBASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Gm18027-201ENSMUST00000218947 619 ntBASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Gm16476-201ENSMUST00000221544 139 ntBASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.35□□□□□ -0.43
Sec61a2Q9JLR1 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Gm13453-201ENSMUST00000118708 357 ntBASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Mir7023-201ENSMUST00000185093 64 ntBASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Matn2-206ENSMUST00000228570 2798 ntBASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms