Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Gm11745-201ENSMUST00000121669 448 ntBASIC12.97□□□□□ -0.33
Upk1aQ9D132 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Gm27525-201ENSMUST00000184465 107 ntBASIC12.97□□□□□ -0.33
Upk1aQ9D132 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk1aQ9D132 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.97□□□□□ -0.33
Upk1aQ9D132 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk1aQ9D132 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk1aQ9D132 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Gm15678-201ENSMUST00000117573 960 ntBASIC12.96□□□□□ -0.33
Upk1aQ9D132 Gm6222-201ENSMUST00000120787 396 ntBASIC12.96□□□□□ -0.33
Upk1aQ9D132 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Gm38225-201ENSMUST00000194001 393 ntBASIC12.96□□□□□ -0.33
Upk1aQ9D132 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.96□□□□□ -0.33
Upk1aQ9D132 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.96□□□□□ -0.33
Upk1aQ9D132 AW822252-206ENSMUST00000208904 237 ntBASIC12.96□□□□□ -0.33
Upk1aQ9D132 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.96□□□□□ -0.33
Upk1aQ9D132 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk1aQ9D132 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.96□□□□□ -0.33
Upk1aQ9D132 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.96□□□□□ -0.33
Upk1aQ9D132 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.96□□□□□ -0.33
Upk1aQ9D132 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk1aQ9D132 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Upk1aQ9D132 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk1aQ9D132 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Upk1aQ9D132 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk1aQ9D132 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Upk1aQ9D132 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Upk1aQ9D132 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk1aQ9D132 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk1aQ9D132 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk1aQ9D132 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.95□□□□□ -0.34
Upk1aQ9D132 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.95□□□□□ -0.34
Upk1aQ9D132 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Gm25911-201ENSMUST00000157621 56 ntBASIC12.95□□□□□ -0.34
Upk1aQ9D132 Gm27631-201ENSMUST00000184163 466 ntBASIC12.95□□□□□ -0.34
Upk1aQ9D132 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.95□□□□□ -0.34
Upk1aQ9D132 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.95□□□□□ -0.34
Upk1aQ9D132 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms