Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rtn1Q8K0T0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rtn1Q8K0T0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Rtn1Q8K0T0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Gm15770-201ENSMUST00000117498 584 ntBASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn1Q8K0T0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms