Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm17376-201ENSMUST00000166016 84 ntBASIC15.42■□□□□ 0.06
Syne4Q8CII8 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.42■□□□□ 0.06
Syne4Q8CII8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.42■□□□□ 0.06
Syne4Q8CII8 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.42■□□□□ 0.06
Syne4Q8CII8 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.42■□□□□ 0.06
Syne4Q8CII8 Gm18753-201ENSMUST00000201000 566 ntBASIC15.42■□□□□ 0.06
Syne4Q8CII8 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.42■□□□□ 0.06
Syne4Q8CII8 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syne4Q8CII8 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syne4Q8CII8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syne4Q8CII8 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syne4Q8CII8 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Syne4Q8CII8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syne4Q8CII8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Syne4Q8CII8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syne4Q8CII8 Gm44207-201ENSMUST00000204568 1424 ntBASIC15.42■□□□□ 0.06
Syne4Q8CII8 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.42■□□□□ 0.06
Syne4Q8CII8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syne4Q8CII8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Syne4Q8CII8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Syne4Q8CII8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Mir3547-201ENSMUST00000175461 88 ntBASIC15.41■□□□□ 0.06
Syne4Q8CII8 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Gm6082-201ENSMUST00000215204 454 ntBASIC15.41■□□□□ 0.06
Syne4Q8CII8 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syne4Q8CII8 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Syne4Q8CII8 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.41■□□□□ 0.06
Syne4Q8CII8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syne4Q8CII8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Syne4Q8CII8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Syne4Q8CII8 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.4■□□□□ 0.06
Syne4Q8CII8 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Gm2231-201ENSMUST00000125661 612 ntBASIC15.4■□□□□ 0.06
Syne4Q8CII8 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Gm3786-201ENSMUST00000202659 378 ntBASIC15.4■□□□□ 0.06
Syne4Q8CII8 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syne4Q8CII8 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.4■□□□□ 0.06
Syne4Q8CII8 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Syne4Q8CII8 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.4■□□□□ 0.06
Syne4Q8CII8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syne4Q8CII8 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Syne4Q8CII8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syne4Q8CII8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syne4Q8CII8 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syne4Q8CII8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syne4Q8CII8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.39■□□□□ 0.05
Syne4Q8CII8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syne4Q8CII8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syne4Q8CII8 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Syne4Q8CII8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Syne4Q8CII8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syne4Q8CII8 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syne4Q8CII8 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syne4Q8CII8 Gm11591-201ENSMUST00000120063 702 ntBASIC15.39■□□□□ 0.05
Syne4Q8CII8 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Syne4Q8CII8 Gm2445-201ENSMUST00000182798 989 ntBASIC15.39■□□□□ 0.05
Syne4Q8CII8 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.39■□□□□ 0.05
Syne4Q8CII8 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.39■□□□□ 0.05
Syne4Q8CII8 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syne4Q8CII8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Syne4Q8CII8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syne4Q8CII8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms