Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Gm43474-201ENSMUST00000196415 774 ntBASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps9d1Q8C190 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vps9d1Q8C190 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vps9d1Q8C190 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.83□□□□□ -0.35
Vps9d1Q8C190 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Vps9d1Q8C190 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Vps9d1Q8C190 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Gm43125-201ENSMUST00000201724 730 ntBASIC12.83□□□□□ -0.36
Vps9d1Q8C190 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps9d1Q8C190 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Gm25287-201ENSMUST00000103846 110 ntBASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Gm22918-201ENSMUST00000103855 110 ntBASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Gm9824-201ENSMUST00000178707 561 ntBASIC12.82□□□□□ -0.36
Vps9d1Q8C190 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Gm18041-201ENSMUST00000218210 618 ntBASIC12.82□□□□□ -0.36
Vps9d1Q8C190 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vps9d1Q8C190 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms