Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Nudcd1Q6PIP5 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.82□□□□□ -0.2
Nudcd1Q6PIP5 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd1Q6PIP5 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.82□□□□□ -0.2
Nudcd1Q6PIP5 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd1Q6PIP5 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.82□□□□□ -0.2
Nudcd1Q6PIP5 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd1Q6PIP5 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.82□□□□□ -0.2
Nudcd1Q6PIP5 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd1Q6PIP5 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Gm12485-201ENSMUST00000119641 291 ntBASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Gm15376-201ENSMUST00000122258 783 ntBASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd1Q6PIP5 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Gm14127-201ENSMUST00000117906 678 ntBASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Gm13829-201ENSMUST00000119600 138 ntBASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Mir1894-201ENSMUST00000122802 81 ntBASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Gm27892-201ENSMUST00000185017 106 ntBASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd1Q6PIP5 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.79□□□□□ -0.2
Nudcd1Q6PIP5 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nudcd1Q6PIP5 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nudcd1Q6PIP5 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nudcd1Q6PIP5 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nudcd1Q6PIP5 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms