Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col12a1Q60847 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.22□□□□□ -0.29
Col12a1Q60847 Gm18734-201ENSMUST00000172937 808 ntBASIC13.22□□□□□ -0.29
Col12a1Q60847 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col12a1Q60847 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col12a1Q60847 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.22□□□□□ -0.29
Col12a1Q60847 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col12a1Q60847 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col12a1Q60847 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col12a1Q60847 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col12a1Q60847 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col12a1Q60847 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col12a1Q60847 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.21□□□□□ -0.29
Col12a1Q60847 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.21□□□□□ -0.29
Col12a1Q60847 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col12a1Q60847 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col12a1Q60847 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col12a1Q60847 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.21□□□□□ -0.29
Col12a1Q60847 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col12a1Q60847 Gm38210-201ENSMUST00000191944 809 ntBASIC13.21□□□□□ -0.29
Col12a1Q60847 Gm32025-201ENSMUST00000217960 307 ntBASIC13.21□□□□□ -0.29
Col12a1Q60847 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.21□□□□□ -0.29
Col12a1Q60847 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col12a1Q60847 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col12a1Q60847 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col12a1Q60847 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col12a1Q60847 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.21□□□□□ -0.29
Col12a1Q60847 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col12a1Q60847 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col12a1Q60847 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Col12a1Q60847 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col12a1Q60847 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col12a1Q60847 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Col12a1Q60847 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.21□□□□□ -0.3
Col12a1Q60847 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col12a1Q60847 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col12a1Q60847 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.21□□□□□ -0.3
Col12a1Q60847 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.21□□□□□ -0.3
Col12a1Q60847 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.21□□□□□ -0.3
Col12a1Q60847 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col12a1Q60847 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col12a1Q60847 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col12a1Q60847 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col12a1Q60847 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.2□□□□□ -0.3
Col12a1Q60847 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col12a1Q60847 Daam2-202ENSMUST00000224595 1926 ntBASIC13.2□□□□□ -0.3
Col12a1Q60847 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.2□□□□□ -0.3
Col12a1Q60847 Gm16397-201ENSMUST00000122201 494 ntBASIC13.2□□□□□ -0.3
Col12a1Q60847 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col12a1Q60847 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Col12a1Q60847 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Col12a1Q60847 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col12a1Q60847 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col12a1Q60847 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col12a1Q60847 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col12a1Q60847 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col12a1Q60847 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col12a1Q60847 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.2□□□□□ -0.3
Col12a1Q60847 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.2□□□□□ -0.3
Col12a1Q60847 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.2□□□□□ -0.3
Col12a1Q60847 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col12a1Q60847 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.2□□□□□ -0.3
Col12a1Q60847 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col12a1Q60847 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Col12a1Q60847 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.2□□□□□ -0.3
Col12a1Q60847 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col12a1Q60847 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col12a1Q60847 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col12a1Q60847 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col12a1Q60847 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col12a1Q60847 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col12a1Q60847 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 Rmrp-201ENSMUST00000157463 271 ntBASIC13.19□□□□□ -0.3
Col12a1Q60847 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.19□□□□□ -0.3
Col12a1Q60847 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 Gm10179-201ENSMUST00000086233 688 ntBASIC13.19□□□□□ -0.3
Col12a1Q60847 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col12a1Q60847 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Col12a1Q60847 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.19□□□□□ -0.3
Col12a1Q60847 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Col12a1Q60847 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.19□□□□□ -0.3
Col12a1Q60847 Gm10051-201ENSMUST00000145209 414 ntBASIC13.19□□□□□ -0.3
Col12a1Q60847 Gm25043-201ENSMUST00000158604 212 ntBASIC13.19□□□□□ -0.3
Col12a1Q60847 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.19□□□□□ -0.3
Col12a1Q60847 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 Gm28693-202ENSMUST00000190758 331 ntBASIC13.19□□□□□ -0.3
Col12a1Q60847 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.19□□□□□ -0.3
Col12a1Q60847 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.19□□□□□ -0.3
Col12a1Q60847 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col12a1Q60847 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms