Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim41Q5NCC3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Gm12537-201ENSMUST00000119266 1002 ntBASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Gm12070-201ENSMUST00000119551 1002 ntBASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Gm12671-201ENSMUST00000119978 1002 ntBASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Gm13292-201ENSMUST00000120014 1000 ntBASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Gm12403-201ENSMUST00000121384 959 ntBASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Gm10359-201ENSMUST00000180167 1002 ntBASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Gm12033-201ENSMUST00000180654 1002 ntBASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Gm5559-201ENSMUST00000180755 1002 ntBASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Gm4335-201ENSMUST00000182581 1004 ntBASIC23.66■■□□□ 1.38
Trim41Q5NCC3 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Gm18556-201ENSMUST00000219748 1031 ntBASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
Trim41Q5NCC3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Trim41Q5NCC3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim41Q5NCC3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim41Q5NCC3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim41Q5NCC3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Trim41Q5NCC3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Trim41Q5NCC3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim41Q5NCC3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Trim41Q5NCC3 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Trim41Q5NCC3 Gm12241-201ENSMUST00000118330 726 ntBASIC23.65■■□□□ 1.38
Trim41Q5NCC3 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Trim41Q5NCC3 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC23.65■■□□□ 1.38
Trim41Q5NCC3 Olfr284-202ENSMUST00000206647 966 ntBASIC23.65■■□□□ 1.38
Trim41Q5NCC3 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim41Q5NCC3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Trim41Q5NCC3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Trim41Q5NCC3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Trim41Q5NCC3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim41Q5NCC3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC23.64■■□□□ 1.38
Trim41Q5NCC3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC23.64■■□□□ 1.38
Trim41Q5NCC3 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trim41Q5NCC3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trim41Q5NCC3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trim41Q5NCC3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Trim41Q5NCC3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Trim41Q5NCC3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
Trim41Q5NCC3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC23.64■■□□□ 1.37
Trim41Q5NCC3 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC23.64■■□□□ 1.37
Trim41Q5NCC3 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC23.64■■□□□ 1.37
Trim41Q5NCC3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC23.64■■□□□ 1.37
Trim41Q5NCC3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC23.64■■□□□ 1.37
Trim41Q5NCC3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Trim41Q5NCC3 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Trim41Q5NCC3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trim41Q5NCC3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Trim41Q5NCC3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trim41Q5NCC3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trim41Q5NCC3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trim41Q5NCC3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC23.64■■□□□ 1.37
Trim41Q5NCC3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC23.64■■□□□ 1.37
Trim41Q5NCC3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC23.64■■□□□ 1.37
Trim41Q5NCC3 Gm9755-201ENSMUST00000032981 1356 ntBASIC23.64■■□□□ 1.37
Trim41Q5NCC3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Trim41Q5NCC3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim41Q5NCC3 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim41Q5NCC3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Trim41Q5NCC3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC23.63■■□□□ 1.37
Trim41Q5NCC3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim41Q5NCC3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim41Q5NCC3 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Trim41Q5NCC3 Gm24255-201ENSMUST00000104481 128 ntBASIC23.63■■□□□ 1.37
Trim41Q5NCC3 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim41Q5NCC3 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms