Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox4Q06831 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.46□□□□□ -0.25
Sox4Q06831 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox4Q06831 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox4Q06831 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox4Q06831 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox4Q06831 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.26
Sox4Q06831 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox4Q06831 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox4Q06831 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox4Q06831 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Sox4Q06831 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Sox4Q06831 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox4Q06831 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox4Q06831 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Sox4Q06831 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.45□□□□□ -0.26
Sox4Q06831 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.45□□□□□ -0.26
Sox4Q06831 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.45□□□□□ -0.26
Sox4Q06831 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Gm26464-201ENSMUST00000157094 305 ntBASIC13.45□□□□□ -0.26
Sox4Q06831 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Sox4Q06831 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.45□□□□□ -0.26
Sox4Q06831 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.45□□□□□ -0.26
Sox4Q06831 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.45□□□□□ -0.26
Sox4Q06831 Gm8515-201ENSMUST00000194852 576 ntBASIC13.45□□□□□ -0.26
Sox4Q06831 Gm18307-201ENSMUST00000206864 949 ntBASIC13.45□□□□□ -0.26
Sox4Q06831 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.45□□□□□ -0.26
Sox4Q06831 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.45□□□□□ -0.26
Sox4Q06831 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.45□□□□□ -0.26
Sox4Q06831 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Sox4Q06831 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sox4Q06831 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Sox4Q06831 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Sox4Q06831 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Sox4Q06831 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox4Q06831 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.44□□□□□ -0.26
Sox4Q06831 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.44□□□□□ -0.26
Sox4Q06831 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.44□□□□□ -0.26
Sox4Q06831 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Sox4Q06831 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.44□□□□□ -0.26
Sox4Q06831 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Gm9908-201ENSMUST00000211534 448 ntBASIC13.44□□□□□ -0.26
Sox4Q06831 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Sox4Q06831 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Sox4Q06831 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Sox4Q06831 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Sox4Q06831 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox4Q06831 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.44□□□□□ -0.26
Sox4Q06831 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Sox4Q06831 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms