Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.96□□□□□ -0.17
Thumpd3P97770 Gm15693-201ENSMUST00000120470 637 ntBASIC13.96□□□□□ -0.17
Thumpd3P97770 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.96□□□□□ -0.17
Thumpd3P97770 Gm27618-201ENSMUST00000183671 60 ntBASIC13.96□□□□□ -0.17
Thumpd3P97770 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.96□□□□□ -0.17
Thumpd3P97770 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd3P97770 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd3P97770 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Thumpd3P97770 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Thumpd3P97770 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd3P97770 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd3P97770 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Thumpd3P97770 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd3P97770 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Thumpd3P97770 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Thumpd3P97770 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Thumpd3P97770 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Thumpd3P97770 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Thumpd3P97770 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Thumpd3P97770 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Thumpd3P97770 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Thumpd3P97770 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Thumpd3P97770 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.96□□□□□ -0.18
Thumpd3P97770 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Thumpd3P97770 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Thumpd3P97770 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Thumpd3P97770 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.95□□□□□ -0.18
Thumpd3P97770 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.95□□□□□ -0.18
Thumpd3P97770 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.95□□□□□ -0.18
Thumpd3P97770 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.95□□□□□ -0.18
Thumpd3P97770 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Thumpd3P97770 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.95□□□□□ -0.18
Thumpd3P97770 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Thumpd3P97770 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Thumpd3P97770 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Thumpd3P97770 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.95□□□□□ -0.18
Thumpd3P97770 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Thumpd3P97770 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd3P97770 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Thumpd3P97770 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Thumpd3P97770 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.94□□□□□ -0.18
Thumpd3P97770 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Thumpd3P97770 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Gm12882-201ENSMUST00000121696 517 ntBASIC13.94□□□□□ -0.18
Thumpd3P97770 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.94□□□□□ -0.18
Thumpd3P97770 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Thumpd3P97770 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.94□□□□□ -0.18
Thumpd3P97770 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.94□□□□□ -0.18
Thumpd3P97770 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.94□□□□□ -0.18
Thumpd3P97770 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Thumpd3P97770 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Thumpd3P97770 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Thumpd3P97770 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.94□□□□□ -0.18
Thumpd3P97770 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd3P97770 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms