Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd48P18181 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd48P18181 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd48P18181 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd48P18181 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cd48P18181 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.3□□□□□ -0.44
Cd48P18181 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.3□□□□□ -0.44
Cd48P18181 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.3□□□□□ -0.44
Cd48P18181 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.3□□□□□ -0.44
Cd48P18181 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Cd48P18181 Gm25911-201ENSMUST00000157621 56 ntBASIC12.3□□□□□ -0.44
Cd48P18181 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cd48P18181 Gm27525-201ENSMUST00000184465 107 ntBASIC12.3□□□□□ -0.44
Cd48P18181 Gm2756-201ENSMUST00000195851 400 ntBASIC12.3□□□□□ -0.44
Cd48P18181 Gm2213-201ENSMUST00000197485 688 ntBASIC12.3□□□□□ -0.44
Cd48P18181 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.3□□□□□ -0.44
Cd48P18181 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.3□□□□□ -0.44
Cd48P18181 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.3□□□□□ -0.44
Cd48P18181 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.3□□□□□ -0.44
Cd48P18181 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cd48P18181 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd48P18181 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cd48P18181 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cd48P18181 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cd48P18181 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cd48P18181 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cd48P18181 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cd48P18181 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cd48P18181 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cd48P18181 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cd48P18181 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cd48P18181 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cd48P18181 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Cd48P18181 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.29□□□□□ -0.44
Cd48P18181 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cd48P18181 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cd48P18181 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cd48P18181 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.29□□□□□ -0.44
Cd48P18181 Gm22065-201ENSMUST00000103753 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm22066-201ENSMUST00000103761 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm24932-201ENSMUST00000103763 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm24115-201ENSMUST00000103799 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm22190-201ENSMUST00000103827 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm22191-201ENSMUST00000103831 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm24721-201ENSMUST00000103849 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm28018-201ENSMUST00000103869 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm26399-201ENSMUST00000103937 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Cd48P18181 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.29□□□□□ -0.44
Cd48P18181 Gm13015-201ENSMUST00000118674 204 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.29□□□□□ -0.44
Cd48P18181 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cd48P18181 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cd48P18181 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cd48P18181 Gm25349-201ENSMUST00000177728 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm23616-201ENSMUST00000177797 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm25871-201ENSMUST00000177816 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm24752-201ENSMUST00000178240 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm24496-201ENSMUST00000178287 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm25649-201ENSMUST00000178476 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm25548-201ENSMUST00000178681 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm23147-201ENSMUST00000178841 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm26095-201ENSMUST00000179270 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm22171-201ENSMUST00000179283 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm23936-201ENSMUST00000179354 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm22619-201ENSMUST00000179516 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm25255-201ENSMUST00000179579 110 ntBASIC12.29□□□□□ -0.44
Cd48P18181 Gm24755-201ENSMUST00000179691 110 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms