Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 PTCHD3P3-201ENST00000403073 906 ntBASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 DUSP5P1-201ENST00000441325 1139 ntBASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 FAM197Y8-203ENST00000450145 560 ntBASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 RNPS1P1-201ENST00000507437 918 ntBASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 AL121912.1-201ENST00000603683 238 ntBASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 AC107918.4-202ENST00000641623 219 ntBASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 UBALD1-205ENST00000590891 2641 ntBASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 AC006504.4-201ENST00000592118 1568 ntBASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRGV1A0A0A0MS02 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 RPS2P28-201ENST00000314255 741 ntBASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms