Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5493S4R2D1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5493S4R2D1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5493S4R2D1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5493S4R2D1 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.23■□□□□ 0.51
Gm5493S4R2D1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.23■□□□□ 0.51
Gm5493S4R2D1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.23■□□□□ 0.51
Gm5493S4R2D1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5493S4R2D1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5493S4R2D1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5493S4R2D1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5493S4R2D1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5493S4R2D1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5493S4R2D1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5493S4R2D1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5493S4R2D1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5493S4R2D1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5493S4R2D1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5493S4R2D1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5493S4R2D1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5493S4R2D1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5493S4R2D1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5493S4R2D1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5493S4R2D1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5493S4R2D1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Gm5493S4R2D1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5493S4R2D1 Gm37136-201ENSMUST00000194368 194 ntBASIC18.2■□□□□ 0.5
Gm5493S4R2D1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5493S4R2D1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5493S4R2D1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.19■□□□□ 0.5
Gm5493S4R2D1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5493S4R2D1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5493S4R2D1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5493S4R2D1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.19■□□□□ 0.5
Gm5493S4R2D1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5493S4R2D1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5493S4R2D1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5493S4R2D1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5493S4R2D1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5493S4R2D1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.18■□□□□ 0.5
Gm5493S4R2D1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5493S4R2D1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5493S4R2D1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5493S4R2D1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5493S4R2D1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5493S4R2D1 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.17■□□□□ 0.5
Gm5493S4R2D1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5493S4R2D1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.17■□□□□ 0.5
Gm5493S4R2D1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5493S4R2D1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Gm5493S4R2D1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5493S4R2D1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Gm5493S4R2D1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5493S4R2D1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5493S4R2D1 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.16■□□□□ 0.5
Gm5493S4R2D1 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.15■□□□□ 0.5
Gm5493S4R2D1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.15■□□□□ 0.5
Gm5493S4R2D1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5493S4R2D1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5493S4R2D1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
Gm5493S4R2D1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5493S4R2D1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5493S4R2D1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5493S4R2D1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5493S4R2D1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5493S4R2D1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Gm5493S4R2D1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5493S4R2D1 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.14■□□□□ 0.49
Gm5493S4R2D1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Gm5493S4R2D1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5493S4R2D1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5493S4R2D1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm5493S4R2D1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5493S4R2D1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5493S4R2D1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5493S4R2D1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5493S4R2D1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.13■□□□□ 0.49
Gm5493S4R2D1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Gm5493S4R2D1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5493S4R2D1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5493S4R2D1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5493S4R2D1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5493S4R2D1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
Gm5493S4R2D1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5493S4R2D1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5493S4R2D1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5493S4R2D1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Gm5493S4R2D1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
Gm5493S4R2D1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5493S4R2D1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5493S4R2D1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5493S4R2D1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5493S4R2D1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5493S4R2D1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.11■□□□□ 0.49
Gm5493S4R2D1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5493S4R2D1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5493S4R2D1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5493S4R2D1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5493S4R2D1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5493S4R2D1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms