Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rbfox1Q9JJ43 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rbfox1Q9JJ43 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rbfox1Q9JJ43 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rbfox1Q9JJ43 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rbfox1Q9JJ43 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rbfox1Q9JJ43 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rbfox1Q9JJ43 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rbfox1Q9JJ43 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rbfox1Q9JJ43 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.37■□□□□ 0.53
Rbfox1Q9JJ43 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rbfox1Q9JJ43 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.37■□□□□ 0.53
Rbfox1Q9JJ43 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.37■□□□□ 0.53
Rbfox1Q9JJ43 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rbfox1Q9JJ43 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.37■□□□□ 0.53
Rbfox1Q9JJ43 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rbfox1Q9JJ43 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rbfox1Q9JJ43 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rbfox1Q9JJ43 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.36■□□□□ 0.53
Rbfox1Q9JJ43 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rbfox1Q9JJ43 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.35■□□□□ 0.53
Rbfox1Q9JJ43 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rbfox1Q9JJ43 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.35■□□□□ 0.53
Rbfox1Q9JJ43 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rbfox1Q9JJ43 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.34■□□□□ 0.53
Rbfox1Q9JJ43 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rbfox1Q9JJ43 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rbfox1Q9JJ43 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rbfox1Q9JJ43 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rbfox1Q9JJ43 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rbfox1Q9JJ43 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.34■□□□□ 0.53
Rbfox1Q9JJ43 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rbfox1Q9JJ43 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rbfox1Q9JJ43 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.34■□□□□ 0.53
Rbfox1Q9JJ43 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.33■□□□□ 0.53
Rbfox1Q9JJ43 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Rbfox1Q9JJ43 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.33■□□□□ 0.52
Rbfox1Q9JJ43 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rbfox1Q9JJ43 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rbfox1Q9JJ43 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rbfox1Q9JJ43 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rbfox1Q9JJ43 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.32■□□□□ 0.52
Rbfox1Q9JJ43 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rbfox1Q9JJ43 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbfox1Q9JJ43 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbfox1Q9JJ43 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbfox1Q9JJ43 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
Rbfox1Q9JJ43 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbfox1Q9JJ43 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Rbfox1Q9JJ43 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rbfox1Q9JJ43 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbfox1Q9JJ43 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rbfox1Q9JJ43 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rbfox1Q9JJ43 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbfox1Q9JJ43 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rbfox1Q9JJ43 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rbfox1Q9JJ43 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rbfox1Q9JJ43 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rbfox1Q9JJ43 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Rbfox1Q9JJ43 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rbfox1Q9JJ43 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rbfox1Q9JJ43 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rbfox1Q9JJ43 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
Rbfox1Q9JJ43 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rbfox1Q9JJ43 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rbfox1Q9JJ43 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rbfox1Q9JJ43 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rbfox1Q9JJ43 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rbfox1Q9JJ43 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rbfox1Q9JJ43 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rbfox1Q9JJ43 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rbfox1Q9JJ43 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.28■□□□□ 0.52
Rbfox1Q9JJ43 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rbfox1Q9JJ43 Gm6311-201ENSMUST00000073790 878 ntBASIC18.28■□□□□ 0.52
Rbfox1Q9JJ43 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Rbfox1Q9JJ43 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.28■□□□□ 0.52
Rbfox1Q9JJ43 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rbfox1Q9JJ43 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rbfox1Q9JJ43 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rbfox1Q9JJ43 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Rbfox1Q9JJ43 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.27■□□□□ 0.52
Rbfox1Q9JJ43 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Rbfox1Q9JJ43 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Rbfox1Q9JJ43 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rbfox1Q9JJ43 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Rbfox1Q9JJ43 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Rbfox1Q9JJ43 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rbfox1Q9JJ43 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Rbfox1Q9JJ43 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rbfox1Q9JJ43 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rbfox1Q9JJ43 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.26■□□□□ 0.51
Rbfox1Q9JJ43 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.26■□□□□ 0.51
Rbfox1Q9JJ43 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rbfox1Q9JJ43 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rbfox1Q9JJ43 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rbfox1Q9JJ43 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.26■□□□□ 0.51
Rbfox1Q9JJ43 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rbfox1Q9JJ43 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.26■□□□□ 0.51
Rbfox1Q9JJ43 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rbfox1Q9JJ43 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms