Protein–RNA interactions for Protein: Q9D0C1

Rnf115, E3 ubiquitin-protein ligase RNF115, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf115Q9D0C1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf115Q9D0C1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf115Q9D0C1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rnf115Q9D0C1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf115Q9D0C1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf115Q9D0C1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf115Q9D0C1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf115Q9D0C1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf115Q9D0C1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf115Q9D0C1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rnf115Q9D0C1 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.45■□□□□ 0.54
Rnf115Q9D0C1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.45■□□□□ 0.54
Rnf115Q9D0C1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Rnf115Q9D0C1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.45■□□□□ 0.54
Rnf115Q9D0C1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf115Q9D0C1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rnf115Q9D0C1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf115Q9D0C1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf115Q9D0C1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf115Q9D0C1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf115Q9D0C1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Rnf115Q9D0C1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf115Q9D0C1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf115Q9D0C1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf115Q9D0C1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf115Q9D0C1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf115Q9D0C1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.43■□□□□ 0.54
Rnf115Q9D0C1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.43■□□□□ 0.54
Rnf115Q9D0C1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rnf115Q9D0C1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf115Q9D0C1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rnf115Q9D0C1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf115Q9D0C1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf115Q9D0C1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf115Q9D0C1 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.42■□□□□ 0.54
Rnf115Q9D0C1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf115Q9D0C1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf115Q9D0C1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rnf115Q9D0C1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf115Q9D0C1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf115Q9D0C1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf115Q9D0C1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf115Q9D0C1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.41■□□□□ 0.54
Rnf115Q9D0C1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rnf115Q9D0C1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.41■□□□□ 0.54
Rnf115Q9D0C1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf115Q9D0C1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf115Q9D0C1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rnf115Q9D0C1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.4■□□□□ 0.54
Rnf115Q9D0C1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf115Q9D0C1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf115Q9D0C1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Rnf115Q9D0C1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.4■□□□□ 0.54
Rnf115Q9D0C1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf115Q9D0C1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf115Q9D0C1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf115Q9D0C1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.39■□□□□ 0.53
Rnf115Q9D0C1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf115Q9D0C1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf115Q9D0C1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf115Q9D0C1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf115Q9D0C1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf115Q9D0C1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf115Q9D0C1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf115Q9D0C1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf115Q9D0C1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rnf115Q9D0C1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rnf115Q9D0C1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf115Q9D0C1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf115Q9D0C1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rnf115Q9D0C1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf115Q9D0C1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf115Q9D0C1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf115Q9D0C1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf115Q9D0C1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf115Q9D0C1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.37■□□□□ 0.53
Rnf115Q9D0C1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf115Q9D0C1 Gm7417-201ENSMUST00000192950 473 ntBASIC18.37■□□□□ 0.53
Rnf115Q9D0C1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf115Q9D0C1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf115Q9D0C1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.37■□□□□ 0.53
Rnf115Q9D0C1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Rnf115Q9D0C1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rnf115Q9D0C1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf115Q9D0C1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf115Q9D0C1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf115Q9D0C1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.36■□□□□ 0.53
Rnf115Q9D0C1 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.36■□□□□ 0.53
Rnf115Q9D0C1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rnf115Q9D0C1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rnf115Q9D0C1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.36■□□□□ 0.53
Rnf115Q9D0C1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf115Q9D0C1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.36■□□□□ 0.53
Rnf115Q9D0C1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Rnf115Q9D0C1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf115Q9D0C1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf115Q9D0C1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.35■□□□□ 0.53
Rnf115Q9D0C1 Gm13241-201ENSMUST00000094493 780 ntBASIC18.35■□□□□ 0.53
Rnf115Q9D0C1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf115Q9D0C1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms