Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Pcdhb20Q91XZ9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Pcdhb20Q91XZ9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb20Q91XZ9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb20Q91XZ9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.73■□□□□ 0.91
Pcdhb20Q91XZ9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb20Q91XZ9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.72■□□□□ 0.91
Pcdhb20Q91XZ9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb20Q91XZ9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Pcdhb20Q91XZ9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb20Q91XZ9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb20Q91XZ9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb20Q91XZ9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb20Q91XZ9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb20Q91XZ9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb20Q91XZ9 Gm15823-201ENSMUST00000064305 670 ntBASIC20.71■□□□□ 0.91
Pcdhb20Q91XZ9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb20Q91XZ9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb20Q91XZ9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb20Q91XZ9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb20Q91XZ9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pcdhb20Q91XZ9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb20Q91XZ9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb20Q91XZ9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb20Q91XZ9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb20Q91XZ9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.69■□□□□ 0.9
Pcdhb20Q91XZ9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb20Q91XZ9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Pcdhb20Q91XZ9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb20Q91XZ9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb20Q91XZ9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb20Q91XZ9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb20Q91XZ9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdhb20Q91XZ9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb20Q91XZ9 Gm15820-201ENSMUST00000201566 728 ntBASIC20.68■□□□□ 0.9
Pcdhb20Q91XZ9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Pcdhb20Q91XZ9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Pcdhb20Q91XZ9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb20Q91XZ9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb20Q91XZ9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb20Q91XZ9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb20Q91XZ9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb20Q91XZ9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb20Q91XZ9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb20Q91XZ9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb20Q91XZ9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb20Q91XZ9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb20Q91XZ9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb20Q91XZ9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb20Q91XZ9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.66■□□□□ 0.9
Pcdhb20Q91XZ9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhb20Q91XZ9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Pcdhb20Q91XZ9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.66■□□□□ 0.9
Pcdhb20Q91XZ9 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.66■□□□□ 0.9
Pcdhb20Q91XZ9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb20Q91XZ9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb20Q91XZ9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb20Q91XZ9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb20Q91XZ9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb20Q91XZ9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb20Q91XZ9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb20Q91XZ9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb20Q91XZ9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb20Q91XZ9 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.65■□□□□ 0.9
Pcdhb20Q91XZ9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb20Q91XZ9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Pcdhb20Q91XZ9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb20Q91XZ9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhb20Q91XZ9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.64■□□□□ 0.89
Pcdhb20Q91XZ9 Gm10232-201ENSMUST00000089221 720 ntBASIC20.64■□□□□ 0.89
Pcdhb20Q91XZ9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Pcdhb20Q91XZ9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb20Q91XZ9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb20Q91XZ9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb20Q91XZ9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb20Q91XZ9 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.63■□□□□ 0.89
Pcdhb20Q91XZ9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb20Q91XZ9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb20Q91XZ9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.63■□□□□ 0.89
Pcdhb20Q91XZ9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb20Q91XZ9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb20Q91XZ9 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.62■□□□□ 0.89
Pcdhb20Q91XZ9 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.62■□□□□ 0.89
Pcdhb20Q91XZ9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb20Q91XZ9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb20Q91XZ9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb20Q91XZ9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.61■□□□□ 0.89
Pcdhb20Q91XZ9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhb20Q91XZ9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb20Q91XZ9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb20Q91XZ9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb20Q91XZ9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb20Q91XZ9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb20Q91XZ9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdhb20Q91XZ9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Pcdhb20Q91XZ9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Pcdhb20Q91XZ9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb20Q91XZ9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb20Q91XZ9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb20Q91XZ9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms