Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.26■□□□□ 0.99
Retreg1dQ8VE91 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retreg1dQ8VE91 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Retreg1dQ8VE91 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Retreg1dQ8VE91 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retreg1dQ8VE91 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Retreg1dQ8VE91 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retreg1dQ8VE91 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retreg1dQ8VE91 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Retreg1dQ8VE91 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retreg1dQ8VE91 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retreg1dQ8VE91 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retreg1dQ8VE91 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Retreg1dQ8VE91 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retreg1dQ8VE91 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.24■□□□□ 0.99
Retreg1dQ8VE91 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.24■□□□□ 0.99
Retreg1dQ8VE91 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retreg1dQ8VE91 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retreg1dQ8VE91 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retreg1dQ8VE91 Gm15820-201ENSMUST00000201566 728 ntBASIC21.23■□□□□ 0.99
Retreg1dQ8VE91 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retreg1dQ8VE91 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.23■□□□□ 0.99
Retreg1dQ8VE91 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retreg1dQ8VE91 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Retreg1dQ8VE91 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retreg1dQ8VE91 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retreg1dQ8VE91 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retreg1dQ8VE91 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retreg1dQ8VE91 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.21■□□□□ 0.99
Retreg1dQ8VE91 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Retreg1dQ8VE91 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.21■□□□□ 0.99
Retreg1dQ8VE91 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retreg1dQ8VE91 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retreg1dQ8VE91 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Retreg1dQ8VE91 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retreg1dQ8VE91 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Retreg1dQ8VE91 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retreg1dQ8VE91 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retreg1dQ8VE91 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retreg1dQ8VE91 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retreg1dQ8VE91 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retreg1dQ8VE91 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.19■□□□□ 0.98
Retreg1dQ8VE91 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retreg1dQ8VE91 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.18■□□□□ 0.98
Retreg1dQ8VE91 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retreg1dQ8VE91 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retreg1dQ8VE91 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retreg1dQ8VE91 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
Retreg1dQ8VE91 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retreg1dQ8VE91 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retreg1dQ8VE91 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retreg1dQ8VE91 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retreg1dQ8VE91 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retreg1dQ8VE91 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retreg1dQ8VE91 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retreg1dQ8VE91 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Retreg1dQ8VE91 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Retreg1dQ8VE91 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Retreg1dQ8VE91 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.17■□□□□ 0.98
Retreg1dQ8VE91 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.17■□□□□ 0.98
Retreg1dQ8VE91 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retreg1dQ8VE91 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retreg1dQ8VE91 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.17■□□□□ 0.98
Retreg1dQ8VE91 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retreg1dQ8VE91 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retreg1dQ8VE91 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retreg1dQ8VE91 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retreg1dQ8VE91 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retreg1dQ8VE91 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retreg1dQ8VE91 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retreg1dQ8VE91 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retreg1dQ8VE91 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retreg1dQ8VE91 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retreg1dQ8VE91 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.15■□□□□ 0.98
Retreg1dQ8VE91 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Retreg1dQ8VE91 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.15■□□□□ 0.98
Retreg1dQ8VE91 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retreg1dQ8VE91 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.15■□□□□ 0.98
Retreg1dQ8VE91 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Retreg1dQ8VE91 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retreg1dQ8VE91 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Retreg1dQ8VE91 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retreg1dQ8VE91 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Retreg1dQ8VE91 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Retreg1dQ8VE91 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retreg1dQ8VE91 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Retreg1dQ8VE91 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.14■□□□□ 0.97
Retreg1dQ8VE91 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retreg1dQ8VE91 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.14■□□□□ 0.97
Retreg1dQ8VE91 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retreg1dQ8VE91 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retreg1dQ8VE91 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retreg1dQ8VE91 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retreg1dQ8VE91 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retreg1dQ8VE91 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retreg1dQ8VE91 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Retreg1dQ8VE91 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Retreg1dQ8VE91 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.12■□□□□ 0.97
Retreg1dQ8VE91 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.12■□□□□ 0.97
Retreg1dQ8VE91 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms