Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clip4Q8CI96 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clip4Q8CI96 Gm10420-201ENSMUST00000121713 882 ntBASIC21.6■■□□□ 1.05
Clip4Q8CI96 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clip4Q8CI96 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Clip4Q8CI96 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.59■■□□□ 1.05
Clip4Q8CI96 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Clip4Q8CI96 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.59■■□□□ 1.05
Clip4Q8CI96 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clip4Q8CI96 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clip4Q8CI96 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clip4Q8CI96 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Clip4Q8CI96 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Clip4Q8CI96 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Clip4Q8CI96 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Clip4Q8CI96 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Clip4Q8CI96 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Clip4Q8CI96 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Clip4Q8CI96 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.57■■□□□ 1.04
Clip4Q8CI96 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Clip4Q8CI96 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Clip4Q8CI96 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.56■■□□□ 1.04
Clip4Q8CI96 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.56■■□□□ 1.04
Clip4Q8CI96 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.56■■□□□ 1.04
Clip4Q8CI96 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.56■■□□□ 1.04
Clip4Q8CI96 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.56■■□□□ 1.04
Clip4Q8CI96 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Clip4Q8CI96 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Clip4Q8CI96 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.55■■□□□ 1.04
Clip4Q8CI96 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Clip4Q8CI96 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Clip4Q8CI96 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.55■■□□□ 1.04
Clip4Q8CI96 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Clip4Q8CI96 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.55■■□□□ 1.04
Clip4Q8CI96 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Clip4Q8CI96 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.54■■□□□ 1.04
Clip4Q8CI96 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Clip4Q8CI96 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.54■■□□□ 1.04
Clip4Q8CI96 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Clip4Q8CI96 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Clip4Q8CI96 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Clip4Q8CI96 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Clip4Q8CI96 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Clip4Q8CI96 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Clip4Q8CI96 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Clip4Q8CI96 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Clip4Q8CI96 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.54■■□□□ 1.04
Clip4Q8CI96 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Clip4Q8CI96 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Clip4Q8CI96 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Clip4Q8CI96 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.53■■□□□ 1.04
Clip4Q8CI96 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Clip4Q8CI96 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Clip4Q8CI96 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Clip4Q8CI96 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Clip4Q8CI96 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Clip4Q8CI96 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Clip4Q8CI96 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Clip4Q8CI96 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Clip4Q8CI96 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Clip4Q8CI96 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.52■■□□□ 1.04
Clip4Q8CI96 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Clip4Q8CI96 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Clip4Q8CI96 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Clip4Q8CI96 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Clip4Q8CI96 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Clip4Q8CI96 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Clip4Q8CI96 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Clip4Q8CI96 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Clip4Q8CI96 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Clip4Q8CI96 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.51■■□□□ 1.03
Clip4Q8CI96 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Clip4Q8CI96 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Clip4Q8CI96 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Clip4Q8CI96 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Clip4Q8CI96 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Clip4Q8CI96 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.51■■□□□ 1.03
Clip4Q8CI96 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Clip4Q8CI96 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Clip4Q8CI96 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Clip4Q8CI96 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Clip4Q8CI96 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Clip4Q8CI96 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Clip4Q8CI96 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Clip4Q8CI96 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Clip4Q8CI96 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Clip4Q8CI96 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Clip4Q8CI96 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Clip4Q8CI96 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Clip4Q8CI96 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.49■■□□□ 1.03
Clip4Q8CI96 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Clip4Q8CI96 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Clip4Q8CI96 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Clip4Q8CI96 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Clip4Q8CI96 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Clip4Q8CI96 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Clip4Q8CI96 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Clip4Q8CI96 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.48■■□□□ 1.03
Clip4Q8CI96 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Clip4Q8CI96 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms