Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rdh1Q8CGV4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rdh1Q8CGV4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rdh1Q8CGV4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rdh1Q8CGV4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rdh1Q8CGV4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rdh1Q8CGV4 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.11■□□□□ 0.97
Rdh1Q8CGV4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rdh1Q8CGV4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rdh1Q8CGV4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rdh1Q8CGV4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rdh1Q8CGV4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rdh1Q8CGV4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Rdh1Q8CGV4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rdh1Q8CGV4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rdh1Q8CGV4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rdh1Q8CGV4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.1■□□□□ 0.97
Rdh1Q8CGV4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rdh1Q8CGV4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rdh1Q8CGV4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Rdh1Q8CGV4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rdh1Q8CGV4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Rdh1Q8CGV4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.09■□□□□ 0.97
Rdh1Q8CGV4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.09■□□□□ 0.97
Rdh1Q8CGV4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rdh1Q8CGV4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rdh1Q8CGV4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rdh1Q8CGV4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rdh1Q8CGV4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.08■□□□□ 0.97
Rdh1Q8CGV4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rdh1Q8CGV4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rdh1Q8CGV4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rdh1Q8CGV4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rdh1Q8CGV4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rdh1Q8CGV4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rdh1Q8CGV4 Gm9959-201ENSMUST00000068277 390 ntBASIC21.07■□□□□ 0.96
Rdh1Q8CGV4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rdh1Q8CGV4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rdh1Q8CGV4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rdh1Q8CGV4 Gm14117-201ENSMUST00000122417 843 ntBASIC21.06■□□□□ 0.96
Rdh1Q8CGV4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.06■□□□□ 0.96
Rdh1Q8CGV4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rdh1Q8CGV4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.06■□□□□ 0.96
Rdh1Q8CGV4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.05■□□□□ 0.96
Rdh1Q8CGV4 Gm45102-201ENSMUST00000207427 857 ntBASIC21.05■□□□□ 0.96
Rdh1Q8CGV4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rdh1Q8CGV4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rdh1Q8CGV4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rdh1Q8CGV4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rdh1Q8CGV4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rdh1Q8CGV4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rdh1Q8CGV4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rdh1Q8CGV4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Rdh1Q8CGV4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rdh1Q8CGV4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Rdh1Q8CGV4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rdh1Q8CGV4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Rdh1Q8CGV4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rdh1Q8CGV4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.03■□□□□ 0.96
Rdh1Q8CGV4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rdh1Q8CGV4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Rdh1Q8CGV4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rdh1Q8CGV4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rdh1Q8CGV4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rdh1Q8CGV4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rdh1Q8CGV4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rdh1Q8CGV4 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.02■□□□□ 0.96
Rdh1Q8CGV4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rdh1Q8CGV4 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.02■□□□□ 0.96
Rdh1Q8CGV4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.02■□□□□ 0.96
Rdh1Q8CGV4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
Rdh1Q8CGV4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rdh1Q8CGV4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rdh1Q8CGV4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rdh1Q8CGV4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rdh1Q8CGV4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rdh1Q8CGV4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rdh1Q8CGV4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rdh1Q8CGV4 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rdh1Q8CGV4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rdh1Q8CGV4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rdh1Q8CGV4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rdh1Q8CGV4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rdh1Q8CGV4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21■□□□□ 0.95
Rdh1Q8CGV4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rdh1Q8CGV4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rdh1Q8CGV4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rdh1Q8CGV4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.99■□□□□ 0.95
Rdh1Q8CGV4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rdh1Q8CGV4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.99■□□□□ 0.95
Rdh1Q8CGV4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rdh1Q8CGV4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rdh1Q8CGV4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rdh1Q8CGV4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rdh1Q8CGV4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rdh1Q8CGV4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Rdh1Q8CGV4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rdh1Q8CGV4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rdh1Q8CGV4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.98■□□□□ 0.95
Rdh1Q8CGV4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms