Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.67■■□□□ 1.06
Ppp4r4Q8C0Y0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ppp4r4Q8C0Y0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Ppp4r4Q8C0Y0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ppp4r4Q8C0Y0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ppp4r4Q8C0Y0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Ppp4r4Q8C0Y0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ppp4r4Q8C0Y0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Ppp4r4Q8C0Y0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Ppp4r4Q8C0Y0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ppp4r4Q8C0Y0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ppp4r4Q8C0Y0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ppp4r4Q8C0Y0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ppp4r4Q8C0Y0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ppp4r4Q8C0Y0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ppp4r4Q8C0Y0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ppp4r4Q8C0Y0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ppp4r4Q8C0Y0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.65■■□□□ 1.06
Ppp4r4Q8C0Y0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ppp4r4Q8C0Y0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ppp4r4Q8C0Y0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ppp4r4Q8C0Y0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ppp4r4Q8C0Y0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ppp4r4Q8C0Y0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ppp4r4Q8C0Y0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.64■■□□□ 1.06
Ppp4r4Q8C0Y0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ppp4r4Q8C0Y0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ppp4r4Q8C0Y0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ppp4r4Q8C0Y0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ppp4r4Q8C0Y0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.64■■□□□ 1.05
Ppp4r4Q8C0Y0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ppp4r4Q8C0Y0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ppp4r4Q8C0Y0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ppp4r4Q8C0Y0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Ppp4r4Q8C0Y0 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.63■■□□□ 1.05
Ppp4r4Q8C0Y0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.62■■□□□ 1.05
Ppp4r4Q8C0Y0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ppp4r4Q8C0Y0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ppp4r4Q8C0Y0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ppp4r4Q8C0Y0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ppp4r4Q8C0Y0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.62■■□□□ 1.05
Ppp4r4Q8C0Y0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ppp4r4Q8C0Y0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ppp4r4Q8C0Y0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ppp4r4Q8C0Y0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Ppp4r4Q8C0Y0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ppp4r4Q8C0Y0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ppp4r4Q8C0Y0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ppp4r4Q8C0Y0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Ppp4r4Q8C0Y0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ppp4r4Q8C0Y0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Ppp4r4Q8C0Y0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ppp4r4Q8C0Y0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ppp4r4Q8C0Y0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Ppp4r4Q8C0Y0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ppp4r4Q8C0Y0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ppp4r4Q8C0Y0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ppp4r4Q8C0Y0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.6■■□□□ 1.05
Ppp4r4Q8C0Y0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ppp4r4Q8C0Y0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ppp4r4Q8C0Y0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ppp4r4Q8C0Y0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ppp4r4Q8C0Y0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ppp4r4Q8C0Y0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.59■■□□□ 1.05
Ppp4r4Q8C0Y0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ppp4r4Q8C0Y0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ppp4r4Q8C0Y0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ppp4r4Q8C0Y0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ppp4r4Q8C0Y0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ppp4r4Q8C0Y0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ppp4r4Q8C0Y0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Ppp4r4Q8C0Y0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ppp4r4Q8C0Y0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ppp4r4Q8C0Y0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ppp4r4Q8C0Y0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Ppp4r4Q8C0Y0 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.57■■□□□ 1.04
Ppp4r4Q8C0Y0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Ppp4r4Q8C0Y0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Ppp4r4Q8C0Y0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.56■■□□□ 1.04
Ppp4r4Q8C0Y0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
Ppp4r4Q8C0Y0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ppp4r4Q8C0Y0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ppp4r4Q8C0Y0 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.56■■□□□ 1.04
Ppp4r4Q8C0Y0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Ppp4r4Q8C0Y0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ppp4r4Q8C0Y0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ppp4r4Q8C0Y0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ppp4r4Q8C0Y0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ppp4r4Q8C0Y0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ppp4r4Q8C0Y0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Ppp4r4Q8C0Y0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.54■■□□□ 1.04
Ppp4r4Q8C0Y0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ppp4r4Q8C0Y0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ppp4r4Q8C0Y0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ppp4r4Q8C0Y0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ppp4r4Q8C0Y0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Ppp4r4Q8C0Y0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ppp4r4Q8C0Y0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ppp4r4Q8C0Y0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Ppp4r4Q8C0Y0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms