Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdhr3Q8BL00 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdhr3Q8BL00 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdhr3Q8BL00 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdhr3Q8BL00 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdhr3Q8BL00 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdhr3Q8BL00 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cdhr3Q8BL00 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdhr3Q8BL00 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdhr3Q8BL00 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdhr3Q8BL00 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdhr3Q8BL00 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdhr3Q8BL00 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdhr3Q8BL00 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.84■□□□□ 0.61
Cdhr3Q8BL00 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.83■□□□□ 0.61
Cdhr3Q8BL00 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdhr3Q8BL00 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cdhr3Q8BL00 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdhr3Q8BL00 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.83■□□□□ 0.6
Cdhr3Q8BL00 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdhr3Q8BL00 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdhr3Q8BL00 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdhr3Q8BL00 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdhr3Q8BL00 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdhr3Q8BL00 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdhr3Q8BL00 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cdhr3Q8BL00 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdhr3Q8BL00 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.81■□□□□ 0.6
Cdhr3Q8BL00 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdhr3Q8BL00 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.81■□□□□ 0.6
Cdhr3Q8BL00 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdhr3Q8BL00 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.81■□□□□ 0.6
Cdhr3Q8BL00 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.81■□□□□ 0.6
Cdhr3Q8BL00 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdhr3Q8BL00 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdhr3Q8BL00 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdhr3Q8BL00 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdhr3Q8BL00 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cdhr3Q8BL00 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdhr3Q8BL00 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cdhr3Q8BL00 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cdhr3Q8BL00 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.8■□□□□ 0.6
Cdhr3Q8BL00 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.8■□□□□ 0.6
Cdhr3Q8BL00 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.79■□□□□ 0.6
Cdhr3Q8BL00 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdhr3Q8BL00 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cdhr3Q8BL00 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cdhr3Q8BL00 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdhr3Q8BL00 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdhr3Q8BL00 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.78■□□□□ 0.6
Cdhr3Q8BL00 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cdhr3Q8BL00 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdhr3Q8BL00 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cdhr3Q8BL00 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cdhr3Q8BL00 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cdhr3Q8BL00 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdhr3Q8BL00 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cdhr3Q8BL00 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.76■□□□□ 0.59
Cdhr3Q8BL00 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cdhr3Q8BL00 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdhr3Q8BL00 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.76■□□□□ 0.59
Cdhr3Q8BL00 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdhr3Q8BL00 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdhr3Q8BL00 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Cdhr3Q8BL00 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cdhr3Q8BL00 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdhr3Q8BL00 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Cdhr3Q8BL00 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Cdhr3Q8BL00 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdhr3Q8BL00 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Cdhr3Q8BL00 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdhr3Q8BL00 Gm44428-201ENSMUST00000204474 874 ntBASIC18.75■□□□□ 0.59
Cdhr3Q8BL00 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.75■□□□□ 0.59
Cdhr3Q8BL00 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdhr3Q8BL00 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdhr3Q8BL00 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdhr3Q8BL00 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdhr3Q8BL00 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdhr3Q8BL00 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdhr3Q8BL00 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cdhr3Q8BL00 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.73■□□□□ 0.59
Cdhr3Q8BL00 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.73■□□□□ 0.59
Cdhr3Q8BL00 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdhr3Q8BL00 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdhr3Q8BL00 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cdhr3Q8BL00 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdhr3Q8BL00 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdhr3Q8BL00 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdhr3Q8BL00 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.72■□□□□ 0.59
Cdhr3Q8BL00 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.72■□□□□ 0.59
Cdhr3Q8BL00 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cdhr3Q8BL00 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cdhr3Q8BL00 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdhr3Q8BL00 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cdhr3Q8BL00 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdhr3Q8BL00 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdhr3Q8BL00 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdhr3Q8BL00 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cdhr3Q8BL00 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.71■□□□□ 0.59
Cdhr3Q8BL00 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms