Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atpaf1Q811I0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Atpaf1Q811I0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atpaf1Q811I0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atpaf1Q811I0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atpaf1Q811I0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.65■□□□□ 0.42
Atpaf1Q811I0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atpaf1Q811I0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atpaf1Q811I0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atpaf1Q811I0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atpaf1Q811I0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Atpaf1Q811I0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Atpaf1Q811I0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atpaf1Q811I0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atpaf1Q811I0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atpaf1Q811I0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atpaf1Q811I0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atpaf1Q811I0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
Atpaf1Q811I0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.64■□□□□ 0.41
Atpaf1Q811I0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atpaf1Q811I0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Atpaf1Q811I0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.63■□□□□ 0.41
Atpaf1Q811I0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atpaf1Q811I0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atpaf1Q811I0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atpaf1Q811I0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atpaf1Q811I0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atpaf1Q811I0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Atpaf1Q811I0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atpaf1Q811I0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atpaf1Q811I0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atpaf1Q811I0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atpaf1Q811I0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atpaf1Q811I0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atpaf1Q811I0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atpaf1Q811I0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atpaf1Q811I0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atpaf1Q811I0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atpaf1Q811I0 Zfp131-205ENSMUST00000223812 663 ntBASIC17.6■□□□□ 0.41
Atpaf1Q811I0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Atpaf1Q811I0 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.6■□□□□ 0.41
Atpaf1Q811I0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atpaf1Q811I0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atpaf1Q811I0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atpaf1Q811I0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Atpaf1Q811I0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.59■□□□□ 0.41
Atpaf1Q811I0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atpaf1Q811I0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Atpaf1Q811I0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Atpaf1Q811I0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atpaf1Q811I0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atpaf1Q811I0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atpaf1Q811I0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atpaf1Q811I0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atpaf1Q811I0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atpaf1Q811I0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atpaf1Q811I0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Atpaf1Q811I0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.58■□□□□ 0.4
Atpaf1Q811I0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atpaf1Q811I0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atpaf1Q811I0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atpaf1Q811I0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atpaf1Q811I0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atpaf1Q811I0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Atpaf1Q811I0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atpaf1Q811I0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atpaf1Q811I0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.57■□□□□ 0.4
Atpaf1Q811I0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Atpaf1Q811I0 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.57■□□□□ 0.4
Atpaf1Q811I0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atpaf1Q811I0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atpaf1Q811I0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Atpaf1Q811I0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Atpaf1Q811I0 Gm24970-201ENSMUST00000175582 82 ntBASIC17.56■□□□□ 0.4
Atpaf1Q811I0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.56■□□□□ 0.4
Atpaf1Q811I0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.56■□□□□ 0.4
Atpaf1Q811I0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.56■□□□□ 0.4
Atpaf1Q811I0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atpaf1Q811I0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atpaf1Q811I0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atpaf1Q811I0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atpaf1Q811I0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Atpaf1Q811I0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.55■□□□□ 0.4
Atpaf1Q811I0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Atpaf1Q811I0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Atpaf1Q811I0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atpaf1Q811I0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atpaf1Q811I0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atpaf1Q811I0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atpaf1Q811I0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atpaf1Q811I0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Atpaf1Q811I0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atpaf1Q811I0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atpaf1Q811I0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atpaf1Q811I0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Atpaf1Q811I0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.53■□□□□ 0.4
Atpaf1Q811I0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atpaf1Q811I0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atpaf1Q811I0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atpaf1Q811I0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms