Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Upk3bQ80YF6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Upk3bQ80YF6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Upk3bQ80YF6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Upk3bQ80YF6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk3bQ80YF6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk3bQ80YF6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.24■□□□□ 0.51
Upk3bQ80YF6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Upk3bQ80YF6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk3bQ80YF6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Upk3bQ80YF6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Upk3bQ80YF6 Gm45364-201ENSMUST00000210883 159 ntBASIC18.23■□□□□ 0.51
Upk3bQ80YF6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk3bQ80YF6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk3bQ80YF6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk3bQ80YF6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk3bQ80YF6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.22■□□□□ 0.51
Upk3bQ80YF6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Upk3bQ80YF6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk3bQ80YF6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Upk3bQ80YF6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Upk3bQ80YF6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk3bQ80YF6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk3bQ80YF6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk3bQ80YF6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk3bQ80YF6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk3bQ80YF6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk3bQ80YF6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Upk3bQ80YF6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Upk3bQ80YF6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk3bQ80YF6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk3bQ80YF6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Upk3bQ80YF6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk3bQ80YF6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk3bQ80YF6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Upk3bQ80YF6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Upk3bQ80YF6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Upk3bQ80YF6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk3bQ80YF6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk3bQ80YF6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk3bQ80YF6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk3bQ80YF6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.2■□□□□ 0.5
Upk3bQ80YF6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Upk3bQ80YF6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk3bQ80YF6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Upk3bQ80YF6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk3bQ80YF6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Upk3bQ80YF6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Upk3bQ80YF6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Upk3bQ80YF6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Upk3bQ80YF6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.19■□□□□ 0.5
Upk3bQ80YF6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.19■□□□□ 0.5
Upk3bQ80YF6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Upk3bQ80YF6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Upk3bQ80YF6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Upk3bQ80YF6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Upk3bQ80YF6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk3bQ80YF6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk3bQ80YF6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Upk3bQ80YF6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.18■□□□□ 0.5
Upk3bQ80YF6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk3bQ80YF6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk3bQ80YF6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk3bQ80YF6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk3bQ80YF6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk3bQ80YF6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk3bQ80YF6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk3bQ80YF6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk3bQ80YF6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk3bQ80YF6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Upk3bQ80YF6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk3bQ80YF6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.17■□□□□ 0.5
Upk3bQ80YF6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Upk3bQ80YF6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Upk3bQ80YF6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk3bQ80YF6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.16■□□□□ 0.5
Upk3bQ80YF6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Upk3bQ80YF6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk3bQ80YF6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Upk3bQ80YF6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Upk3bQ80YF6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Upk3bQ80YF6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bQ80YF6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.15■□□□□ 0.5
Upk3bQ80YF6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
Upk3bQ80YF6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bQ80YF6 Gm7432-201ENSMUST00000210343 879 ntBASIC18.15■□□□□ 0.5
Upk3bQ80YF6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bQ80YF6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bQ80YF6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bQ80YF6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bQ80YF6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bQ80YF6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Upk3bQ80YF6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.15■□□□□ 0.5
Upk3bQ80YF6 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.14■□□□□ 0.5
Upk3bQ80YF6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Upk3bQ80YF6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Upk3bQ80YF6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Upk3bQ80YF6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Upk3bQ80YF6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Upk3bQ80YF6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms