Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Kdm1aQ6ZQ88 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Kdm1aQ6ZQ88 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Kdm1aQ6ZQ88 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
Kdm1aQ6ZQ88 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.89■■□□□ 1.41
Kdm1aQ6ZQ88 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Kdm1aQ6ZQ88 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Kdm1aQ6ZQ88 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Kdm1aQ6ZQ88 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Kdm1aQ6ZQ88 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Kdm1aQ6ZQ88 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Kdm1aQ6ZQ88 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Kdm1aQ6ZQ88 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Kdm1aQ6ZQ88 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
Kdm1aQ6ZQ88 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.87■■□□□ 1.41
Kdm1aQ6ZQ88 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Kdm1aQ6ZQ88 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Kdm1aQ6ZQ88 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Kdm1aQ6ZQ88 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Kdm1aQ6ZQ88 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Kdm1aQ6ZQ88 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Kdm1aQ6ZQ88 Dmtn-209ENSMUST00000228295 2572 ntBASIC23.86■■□□□ 1.41
Kdm1aQ6ZQ88 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Kdm1aQ6ZQ88 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Kdm1aQ6ZQ88 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Kdm1aQ6ZQ88 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Kdm1aQ6ZQ88 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Kdm1aQ6ZQ88 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Kdm1aQ6ZQ88 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Kdm1aQ6ZQ88 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Kdm1aQ6ZQ88 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Kdm1aQ6ZQ88 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Kdm1aQ6ZQ88 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Kdm1aQ6ZQ88 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Kdm1aQ6ZQ88 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Kdm1aQ6ZQ88 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.84■■□□□ 1.41
Kdm1aQ6ZQ88 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Kdm1aQ6ZQ88 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.84■■□□□ 1.41
Kdm1aQ6ZQ88 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Kdm1aQ6ZQ88 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Kdm1aQ6ZQ88 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Kdm1aQ6ZQ88 Gm11175-201ENSMUST00000116172 543 ntBASIC23.83■■□□□ 1.41
Kdm1aQ6ZQ88 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Kdm1aQ6ZQ88 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
Kdm1aQ6ZQ88 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Kdm1aQ6ZQ88 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.82■■□□□ 1.4
Kdm1aQ6ZQ88 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Kdm1aQ6ZQ88 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Kdm1aQ6ZQ88 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Kdm1aQ6ZQ88 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Kdm1aQ6ZQ88 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.81■■□□□ 1.4
Kdm1aQ6ZQ88 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Kdm1aQ6ZQ88 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Kdm1aQ6ZQ88 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Kdm1aQ6ZQ88 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Kdm1aQ6ZQ88 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Kdm1aQ6ZQ88 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Kdm1aQ6ZQ88 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Kdm1aQ6ZQ88 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Kdm1aQ6ZQ88 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Kdm1aQ6ZQ88 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Kdm1aQ6ZQ88 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Kdm1aQ6ZQ88 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Kdm1aQ6ZQ88 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Kdm1aQ6ZQ88 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Kdm1aQ6ZQ88 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Kdm1aQ6ZQ88 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Kdm1aQ6ZQ88 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.79■■□□□ 1.4
Kdm1aQ6ZQ88 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Kdm1aQ6ZQ88 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Kdm1aQ6ZQ88 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.79■■□□□ 1.4
Kdm1aQ6ZQ88 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.79■■□□□ 1.4
Kdm1aQ6ZQ88 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.79■■□□□ 1.4
Kdm1aQ6ZQ88 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Kdm1aQ6ZQ88 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Kdm1aQ6ZQ88 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Kdm1aQ6ZQ88 Gm27502-201ENSMUST00000183495 199 ntBASIC23.78■■□□□ 1.4
Kdm1aQ6ZQ88 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Kdm1aQ6ZQ88 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.78■■□□□ 1.4
Kdm1aQ6ZQ88 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Kdm1aQ6ZQ88 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Kdm1aQ6ZQ88 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Kdm1aQ6ZQ88 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Kdm1aQ6ZQ88 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Kdm1aQ6ZQ88 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Kdm1aQ6ZQ88 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Kdm1aQ6ZQ88 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Kdm1aQ6ZQ88 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Kdm1aQ6ZQ88 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Kdm1aQ6ZQ88 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Kdm1aQ6ZQ88 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.77■■□□□ 1.4
Kdm1aQ6ZQ88 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Kdm1aQ6ZQ88 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Kdm1aQ6ZQ88 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Kdm1aQ6ZQ88 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Kdm1aQ6ZQ88 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Kdm1aQ6ZQ88 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Kdm1aQ6ZQ88 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
Kdm1aQ6ZQ88 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Kdm1aQ6ZQ88 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms