Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scube1Q6NZL8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scube1Q6NZL8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scube1Q6NZL8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scube1Q6NZL8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.67■□□□□ 0.9
Scube1Q6NZL8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.67■□□□□ 0.9
Scube1Q6NZL8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scube1Q6NZL8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scube1Q6NZL8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scube1Q6NZL8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scube1Q6NZL8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Scube1Q6NZL8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scube1Q6NZL8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scube1Q6NZL8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scube1Q6NZL8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.65■□□□□ 0.9
Scube1Q6NZL8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scube1Q6NZL8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scube1Q6NZL8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scube1Q6NZL8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scube1Q6NZL8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scube1Q6NZL8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scube1Q6NZL8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Scube1Q6NZL8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Scube1Q6NZL8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Scube1Q6NZL8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scube1Q6NZL8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scube1Q6NZL8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scube1Q6NZL8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Scube1Q6NZL8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.64■□□□□ 0.89
Scube1Q6NZL8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scube1Q6NZL8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Scube1Q6NZL8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scube1Q6NZL8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scube1Q6NZL8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Scube1Q6NZL8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Scube1Q6NZL8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scube1Q6NZL8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Scube1Q6NZL8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Scube1Q6NZL8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Scube1Q6NZL8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.63■□□□□ 0.89
Scube1Q6NZL8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Scube1Q6NZL8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Scube1Q6NZL8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scube1Q6NZL8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scube1Q6NZL8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scube1Q6NZL8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scube1Q6NZL8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scube1Q6NZL8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scube1Q6NZL8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.61■□□□□ 0.89
Scube1Q6NZL8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.61■□□□□ 0.89
Scube1Q6NZL8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scube1Q6NZL8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.61■□□□□ 0.89
Scube1Q6NZL8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scube1Q6NZL8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scube1Q6NZL8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scube1Q6NZL8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scube1Q6NZL8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scube1Q6NZL8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scube1Q6NZL8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scube1Q6NZL8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Scube1Q6NZL8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scube1Q6NZL8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scube1Q6NZL8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scube1Q6NZL8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scube1Q6NZL8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scube1Q6NZL8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Scube1Q6NZL8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.59■□□□□ 0.89
Scube1Q6NZL8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scube1Q6NZL8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scube1Q6NZL8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scube1Q6NZL8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scube1Q6NZL8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scube1Q6NZL8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scube1Q6NZL8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scube1Q6NZL8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scube1Q6NZL8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scube1Q6NZL8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scube1Q6NZL8 Iqck-206ENSMUST00000208658 2891 ntBASIC20.56■□□□□ 0.88
Scube1Q6NZL8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Scube1Q6NZL8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.56■□□□□ 0.88
Scube1Q6NZL8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Scube1Q6NZL8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Scube1Q6NZL8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scube1Q6NZL8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scube1Q6NZL8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scube1Q6NZL8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Scube1Q6NZL8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Scube1Q6NZL8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Scube1Q6NZL8 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.55■□□□□ 0.88
Scube1Q6NZL8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scube1Q6NZL8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scube1Q6NZL8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scube1Q6NZL8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
Scube1Q6NZL8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scube1Q6NZL8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scube1Q6NZL8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scube1Q6NZL8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scube1Q6NZL8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scube1Q6NZL8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scube1Q6NZL8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms