Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Vps13aQ5H8C4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Vps13aQ5H8C4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Vps13aQ5H8C4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Vps13aQ5H8C4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.04■■□□□ 1.12
Vps13aQ5H8C4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Vps13aQ5H8C4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Vps13aQ5H8C4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vps13aQ5H8C4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Vps13aQ5H8C4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vps13aQ5H8C4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.03■■□□□ 1.12
Vps13aQ5H8C4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vps13aQ5H8C4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vps13aQ5H8C4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vps13aQ5H8C4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vps13aQ5H8C4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vps13aQ5H8C4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Vps13aQ5H8C4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Vps13aQ5H8C4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.02■■□□□ 1.12
Vps13aQ5H8C4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vps13aQ5H8C4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vps13aQ5H8C4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vps13aQ5H8C4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vps13aQ5H8C4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.01■■□□□ 1.11
Vps13aQ5H8C4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Vps13aQ5H8C4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22■■□□□ 1.11
Vps13aQ5H8C4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Vps13aQ5H8C4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Vps13aQ5H8C4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vps13aQ5H8C4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
Vps13aQ5H8C4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Vps13aQ5H8C4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.99■■□□□ 1.11
Vps13aQ5H8C4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vps13aQ5H8C4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.99■■□□□ 1.11
Vps13aQ5H8C4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Vps13aQ5H8C4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vps13aQ5H8C4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Vps13aQ5H8C4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vps13aQ5H8C4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vps13aQ5H8C4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
Vps13aQ5H8C4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vps13aQ5H8C4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.97■■□□□ 1.11
Vps13aQ5H8C4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.97■■□□□ 1.11
Vps13aQ5H8C4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vps13aQ5H8C4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vps13aQ5H8C4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.97■■□□□ 1.11
Vps13aQ5H8C4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vps13aQ5H8C4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Vps13aQ5H8C4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Vps13aQ5H8C4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.96■■□□□ 1.11
Vps13aQ5H8C4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vps13aQ5H8C4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.96■■□□□ 1.11
Vps13aQ5H8C4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vps13aQ5H8C4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vps13aQ5H8C4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.96■■□□□ 1.11
Vps13aQ5H8C4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.11
Vps13aQ5H8C4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Vps13aQ5H8C4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Vps13aQ5H8C4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vps13aQ5H8C4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps13aQ5H8C4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps13aQ5H8C4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps13aQ5H8C4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps13aQ5H8C4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Vps13aQ5H8C4 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.93■■□□□ 1.1
Vps13aQ5H8C4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps13aQ5H8C4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps13aQ5H8C4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.93■■□□□ 1.1
Vps13aQ5H8C4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
Vps13aQ5H8C4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps13aQ5H8C4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps13aQ5H8C4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.92■■□□□ 1.1
Vps13aQ5H8C4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps13aQ5H8C4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps13aQ5H8C4 Gm5874-201ENSMUST00000096101 508 ntBASIC21.92■■□□□ 1.1
Vps13aQ5H8C4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps13aQ5H8C4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps13aQ5H8C4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps13aQ5H8C4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps13aQ5H8C4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps13aQ5H8C4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps13aQ5H8C4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps13aQ5H8C4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Vps13aQ5H8C4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps13aQ5H8C4 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.91■■□□□ 1.1
Vps13aQ5H8C4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Vps13aQ5H8C4 Gm26571-201ENSMUST00000181399 666 ntBASIC21.9■■□□□ 1.1
Vps13aQ5H8C4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.9■■□□□ 1.1
Vps13aQ5H8C4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.89■■□□□ 1.1
Vps13aQ5H8C4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Vps13aQ5H8C4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.89■■□□□ 1.1
Vps13aQ5H8C4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vps13aQ5H8C4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vps13aQ5H8C4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.89■■□□□ 1.09
Vps13aQ5H8C4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vps13aQ5H8C4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vps13aQ5H8C4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vps13aQ5H8C4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Vps13aQ5H8C4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Vps13aQ5H8C4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms