Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SgcgP82348 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SgcgP82348 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SgcgP82348 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SgcgP82348 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SgcgP82348 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SgcgP82348 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SgcgP82348 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SgcgP82348 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SgcgP82348 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SgcgP82348 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SgcgP82348 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SgcgP82348 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SgcgP82348 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SgcgP82348 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SgcgP82348 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SgcgP82348 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SgcgP82348 Gm14117-201ENSMUST00000122417 843 ntBASIC21.33■■□□□ 1.01
SgcgP82348 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SgcgP82348 Gm9959-201ENSMUST00000068277 390 ntBASIC21.33■■□□□ 1.01
SgcgP82348 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SgcgP82348 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SgcgP82348 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.33■■□□□ 1
SgcgP82348 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SgcgP82348 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SgcgP82348 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
SgcgP82348 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SgcgP82348 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.32■■□□□ 1
SgcgP82348 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SgcgP82348 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
SgcgP82348 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SgcgP82348 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SgcgP82348 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SgcgP82348 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SgcgP82348 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SgcgP82348 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SgcgP82348 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SgcgP82348 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.3■■□□□ 1
SgcgP82348 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.3■■□□□ 1
SgcgP82348 Gm45102-201ENSMUST00000207427 857 ntBASIC21.3■■□□□ 1
SgcgP82348 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
SgcgP82348 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SgcgP82348 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
SgcgP82348 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SgcgP82348 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SgcgP82348 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SgcgP82348 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SgcgP82348 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SgcgP82348 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.29■■□□□ 1
SgcgP82348 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SgcgP82348 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
SgcgP82348 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.29■■□□□ 1
SgcgP82348 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SgcgP82348 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.28■■□□□ 1
SgcgP82348 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SgcgP82348 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SgcgP82348 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SgcgP82348 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.28■■□□□ 1
SgcgP82348 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.28■■□□□ 1
SgcgP82348 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SgcgP82348 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.28■■□□□ 1
SgcgP82348 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.27■■□□□ 1
SgcgP82348 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SgcgP82348 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SgcgP82348 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.27■■□□□ 1
SgcgP82348 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SgcgP82348 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SgcgP82348 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SgcgP82348 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SgcgP82348 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SgcgP82348 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SgcgP82348 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SgcgP82348 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SgcgP82348 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SgcgP82348 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SgcgP82348 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
SgcgP82348 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SgcgP82348 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SgcgP82348 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.23■□□□□ 0.99
SgcgP82348 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SgcgP82348 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SgcgP82348 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SgcgP82348 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SgcgP82348 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SgcgP82348 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SgcgP82348 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SgcgP82348 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SgcgP82348 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SgcgP82348 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SgcgP82348 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SgcgP82348 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SgcgP82348 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SgcgP82348 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SgcgP82348 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SgcgP82348 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.21■□□□□ 0.99
SgcgP82348 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SgcgP82348 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.21■□□□□ 0.99
SgcgP82348 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.21■□□□□ 0.99
SgcgP82348 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.21■□□□□ 0.99
SgcgP82348 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms